Esox lucius (northern pike): 105024345
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Entry
105024345 CDS
T04894
Symbol
vps18
Name
(RefSeq) vacuolar protein sorting-associated protein 18 homolog
KO
K20181
vacuolar protein sorting-associated protein 18
Organism
els
Esox lucius (northern pike)
Pathway
els04140
Autophagy - animal
els04148
Efferocytosis
els05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
els00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
105024345 (vps18)
04148 Efferocytosis
105024345 (vps18)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
105024345 (vps18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
els04131
]
105024345 (vps18)
Membrane trafficking [BR:
els04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
105024345 (vps18)
Hops complex
105024345 (vps18)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pep3_Vps18
VPS18_RING_C
Clathrin
zf-C3HC4_2
zf-RING_16
zf_RING_Vps8
zf-RING_Vps41
zf-RING_2
zf-RING_11
zf-RING_UBOX
zf-RING_5
DUF1664
zf-ANAPC11
DUF2175
zf-rbx1
DUF5600
KNOX2
zf-C3H2C3
DUF4446
Motif
Other DBs
NCBI-GeneID:
105024345
NCBI-ProteinID:
XP_010892538
LinkDB
All DBs
Position
LG23:5638995..5648783
Genome browser
AA seq
986 aa
AA seq
DB search
MASILDEYEDSQNRRHPVQHSSRLAAANIGITHSGFVNVRLEEEKPIFNKQRIDFTPPEK
INHFAVCNNQLCMSLGKDTLLRIDLAKPDQPNQIELGRKEDSKVHKLFLDPTGSHLVISL
STSECLYLNRNTQKVRSLSRWRGHLIESVGWNKLLGTETNTGPILVGTSQGIIFEAEISA
SEGSLFNTNPDQYFKQVHALEEDGKPAPVCCIEVERGMESKVFIIATTRKRLFQFVGRIP
EGSDQQGFSSIFSQNQELLPSFQEFPFNMGYSEITFYTSKLRICPKAFAWMMGNGVLYGQ
LDYVRPDSLLSDVQVWDYTPDIDFSFNKPISVVLTQFHFLLLLPDRVKAICTLNGQVVYE
DVFPDKFGPLKKMIKDPVGGLIWIYTEKAVFRYHIQREARDVWQMYMSMNKFDLAKEYCR
DRPECMDTVLAKEAEHCFQNKRYMESAKCYALTQNYFEEIALKFIEAKQEEALKEFLLKK
LNNLKESEKTQITLLVMWLTELYLNRLGLLESDEGKYGLFLETREEFRKFLCSSKHKECL
YNNRTTIYDLLASHGNVDDMVYFSVIMQDYERVISHYCQHDDYGAALEVLSKHCDEKLFY
KFSPVLMQHIPKKVVDAWIKMGNRLDPKKLIPALVNYSQMGSTQQINETIRYMEFCVYQL
VVTEEAIHNYLLSLYAKYKPDSLLSYLEQAGTHASDIHYDLKYALRLCAEHGYLQACVLV
YKIMELYEEAVDLALQVDVDLAKSCADLPEDDEELRKKLWLKIARHVVQEEKDVKKAMNC
LSSCNLLKIEDILPFFPDFVTIDHFKEAICSSLEEYNQHIDELKREMEEATESAKRIRED
IQEMRNKYGLVESQEKCAVCDFPLLNRPFYLFLCGHMFHYDCLFQEVNPHLSTYKQSKLE
ELQKKLAAASRTSKSRPRPAPKEKEEGGDSASLGKGSASVSREQIKSDIDDIIACECVYC
GELMIKSIDKPFIDPLKFEEEKSSWL
NT seq
2961 nt
NT seq
+upstream
nt +downstream
nt
atggcttctattctggatgaatacgaagactcgcaaaacaggaggcacccggttcaacac
agtagccgtctggctgctgccaacatcggcataacacactccggatttgtcaatgtcagg
ctcgaagaggagaagcctattttcaacaaacagaggatcgattttacaccgccagaaaag
ataaaccacttcgccgtctgcaacaaccaactatgcatgagtttaggaaaggacactcta
ttgaggattgacctagccaagccggaccagcccaaccagatagagttggggagaaaggag
gacagcaaagtgcacaagctcttcctggatcccactgggtcccacctggtgatctccctc
agcaccagtgagtgcctgtacctgaacaggaacacacagaaagtgcggtcactctcccgt
tggagaggtcacctcatagagagtgtgggctggaacaagttactggggacagagaccaat
accggacccatactagtgggtaccagccaggggataatctttgaggctgagatctctgct
tcagagggaagcttgtttaacaccaaccctgaccagtactttaagcaggtccatgccctg
gaagaggatgggaagccagccccggtgtgctgcattgaggtggagcgaggcatggagtcc
aaggtcttcatcattgccacgacccggaagcgcctgtttcagttcgtaggtcgcataccg
gaggggtcagaccaacaaggtttcagctccatcttctcccagaaccaggagctgttgcct
agcttccaggagtttccctttaacatgggctacagtgagatcaccttctacacctccaag
ctcaggatctgccccaaggccttcgcgtggatgatgggtaatggagttctctacggacag
ctggactacgtgaggccggactcgttgctcagtgacgttcaggtgtgggactacactccg
gacatagacttcagttttaacaagcccatctccgttgtgctgactcagtttcacttcctg
cttctcctccctgatcgtgtcaaagccatctgcacgctaaatgggcaggtggtctacgag
gatgtattcccagacaagttcggccccctgaagaagatgataaaggacccagttggtggc
ctcatctggatctatacagaaaaggctgtattcaggtaccacatccagagggaggccagg
gatgtatggcagatgtacatgagcatgaacaagtttgacctggccaaagagtactgtcga
gaccgtcctgagtgcatggacacggtcctggccaaggaggctgaacactgcttccagaac
aaacgctacatggagagtgccaagtgttacgccctgacccagaactactttgaggagatt
gccctgaagttcatcgaggcaaaacaggaagaggctctgaaagagttcctactgaaaaaa
ctcaacaatctgaaggagagtgagaagacccagatcaccttgctggttatgtggctgact
gagctgtacctgaatcgcctggggcttctagaatccgacgagggcaaatatggactcttc
ctggagacacgggaggagttccggaagtttctctgtagttccaaacacaaggagtgtctt
tataacaatcgtaccaccatctatgacctgctggctagccatggcaacgtggacgacatg
gtctacttctctgtcatcatgcaggattatgagcgggtgatctcccactactgtcagcat
gatgactacggcgccgccctggaggtgctttccaagcactgcgacgagaaactcttctat
aagttctcccctgtcctcatgcagcacatccccaagaaggtggtggacgcctggattaag
atgggcaaccggctggatcctaagaagctgatcccagctctggtcaactacagtcagatg
ggttcgacacaacagatcaacgagacaatccgctacatggagttctgtgtctaccagctg
gtcgtaacagaggaggccatacacaactacctcctctccctgtatgccaagtacaagccc
gactccctgctgtcgtacctggaacaggctggcacccacgcgtcggacatccactatgat
ctgaaatacgccctgaggctgtgcgccgaacacggatacctgcaggcctgtgtgctggtc
tataagatcatggagctgtacgaggaagctgtggatctggccctgcaggtggatgtggac
ttggccaagtcctgtgcggacctgcctgaggatgacgaggagctgaggaagaagctgtgg
ctgaagatcgcccgtcacgtggtgcaggaggagaaggacgtgaagaaggccatgaactgt
ctgtcctcctgcaatctgctcaagatagaggacatcctgcccttcttccctgacttcgtt
actatagaccacttcaaggaagccatctgcagctccctggaggagtacaaccagcacatt
gacgagctgaagcgggagatggaggaggcgacagagagcgccaagcggatcagggaggac
atccaggagatgaggaacaagtatggtctggtggagagccaggagaagtgtgccgtctgt
gacttcccactcctgaacagacctttctacctgttcctctgtggacacatgttccactac
gactgcctcttccaggaggtgaaccctcacctgtccacctacaagcagtccaaactagaa
gagctgcaaaagaagctggctgcagcctcccggacatccaaatcccgcccccgtcccgcc
cccaaggagaaggaggaggggggtgacagcgccagcctggggaaaggatctgccagcgtc
agccgcgagcagatcaagtccgacattgatgacatcattgcgtgcgagtgcgtgtactgt
ggcgagctgatgatcaagtcgatcgacaagccgtttattgacccactgaagttcgaggag
gagaagtccagctggctttga
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