Esox lucius (northern pike): 105024356
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Entry
105024356 CDS
T04894
Name
(RefSeq) integrin alpha-D isoform X2
KO
K06461
integrin alpha M
Organism
els
Esox lucius (northern pike)
Pathway
els04145
Phagosome
els04514
Cell adhesion molecule (CAM) interaction
els04517
IgSF CAM signaling
els04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
els00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
105024356
04517 IgSF CAM signaling
105024356
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
105024356
09142 Cell motility
04810 Regulation of actin cytoskeleton
105024356
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
els04131
]
105024356
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
els04147
]
105024356
04515 Cell adhesion molecules [BR:
els04515
]
105024356
04090 CD molecules [BR:
els04090
]
105024356
00536 Glycosaminoglycan binding proteins [BR:
els00536
]
105024356
Membrane trafficking [BR:
els04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
105024356
Exosome [BR:
els04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
105024356
Cell adhesion molecules [BR:
els04515
]
Integrins
Integrin alpha subunits
105024356
CD molecules [BR:
els04090
]
Proteins
105024356
Glycosaminoglycan binding proteins [BR:
els00536
]
Heparan sulfate / Heparin
Adhesion molecules of cell surface
105024356
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
ITGAX-like_Ig_3
FG-GAP
VWA_2
Integrin_A_Ig_2
Integrin_A_Ig_1
FG-GAP_3
vWA-TerF-like
Copine
GH101_dom-5
Motif
Other DBs
NCBI-GeneID:
105024356
NCBI-ProteinID:
XP_012989162
LinkDB
All DBs
Position
LG05:34007738..34100087
Genome browser
AA seq
1136 aa
AA seq
DB search
MDWIINLSLYLTGVLTFNIDPVAWKHISTPADGFGYKVVQWNPNSLLISAPLEQYEQNRR
GKVYKCQVGGSDCKALSITVPSQGINMSLGLSMTKDPMSSKAMVCGPTIPRECKTITTYN
GMCFQIEQSLSVGSAVPSSLEECPGQTDIAFLLDGSGSVNPTDFVRMKTFVKDLISPFLE
RDTRFALAQYSGYCQIHFKFTDNVDISQVDKISQQGGGTYTAAAITKVVQEIFNSEEHRK
RILIVITDGQSHDSPKLKNAASEAEKKNIIRFAIGVGRAFRTSSAMEELNTIASSPSNKH
VFQVGSFEALNQIKDTLQSSIFPIEGSLTNGESIKMEMGQEGFSAAYLPLEGYLLGSVGA
FQWRGAYLEYKRSTIKATPQQSQKMEPDSYMGYSMAVARTRFRQLTILGAPRFNHTGRVV
VFYSNEKPIEANEKPIEFSGQIGAYFGAEICVVDLENDFYTDLVLISAPMFKDKDREGLV
FVCTINTLFELVCTFNAEMTLKGAAGIIGRFGTSLAPLPDLNVDGFNDLAVGAPLENNGQ
GSVYIFHGSSNGIRQIYSQRISGSDVQSGLMFFGLSISPSSLDMSLDSLPDLAVGSKGAV
IILRSRPIVTVTTEVFFSPSKISTKSSSCNTPHKNTAKVCFTMTKKTAEATKGQARVNYT
LTLDVTRQAPNYRAYYNSQDKIRKKTETVTLTNERMCFNQPFLIMGCPDDALNELSNELD
FTFEGIQFSGGLSPSLSPQSRTTSYHPLGFEINCGTDNNCVDNLKVDFNFTGSLEMKVGI
DDVLNVTVSVESLEENSYNSRVIVTYPAGLSFRKFTTIQGRVECNSMDSEHGVTPGQSDC
VINKPIFRSNSKAVFVLSYGIDSNRQFEQMVTFTANASSGNNAHSLSSELFREKKIGVKY
SIYVLITRGEDSTQYINFTAGKNDLQKHVKQSFVVVNYVRDFNLTVIIKVPMKLGDKSIW
ADQNSIQIPGCHRDKNEGPISTDFVYKLKKDSILDCSVATCGVFMCNVFIRKDAHNSFNI
SGNLSSGWIEQIGLESAQFSLVSTATLDYDRNQYIYFSSDSKNNPHGQTIETQVEVYTEV
NFTKEIIGGAVGGLFLLALITAGLYKAGFFKSHYKQMMKDASGDMPGNDGEAALAE
NT seq
3411 nt
NT seq
+upstream
nt +downstream
nt
atggactggattataaacctttctctttacttaacaggtgttctgactttcaacattgac
cctgttgcttggaagcacattagcacacctgctgatgggtttggctacaaagtggtacag
tggaacccaaatagcttgctcattagcgcacctctggagcagtatgaacaaaatcggagg
ggaaaagtttacaaatgccaagtcggaggttcagattgtaaggcactatcaataaccgtg
cctagtcaagggatcaatatgtcccttggtttgtccatgacaaaggatcccatgtcatca
aaggccatggtatgtggaccaacaatcccaagagagtgcaaaaccatcaccacctataat
gggatgtgctttcaaattgagcaaagtctttctgttgggtcagctgtgccttcatctctg
gaagaatgtcctggacaaacagatatagcttttctactggatggttctggcagtgtaaac
cctaccgattttgtccggatgaaaacctttgtaaaagatctgatcagtccatttctagaa
agggatactaggtttgcacttgcacagtattcaggatattgtcaaatacattttaaattt
actgacaatgttgacatatctcaagttgataaaattagtcaacaaggaggagggacttac
acagcagccgccatcactaaagttgtccaagagatctttaatagtgaagaacacaggaag
aggatcttgatagtcattactgacggacaatcacatgacagtccgaagctgaagaatgca
gcttctgaggctgaaaagaaaaacattattcggtttgccattggggtaggtcgtgccttc
aggacgtcatcagctatggaagagttaaacacaattgcctcctctccatccaacaaacac
gtgtttcaagtgggaagttttgaagcacttaatcaaatcaaggatacattacagagcagt
atttttcctattgaaggatctctgaccaatggagaatctattaagatggaaatgggccag
gaaggattcagtgcagcatatttgcctttggaaggatacctgttgggatctgttggagcc
tttcagtggaggggcgcttacctggaatacaaaagaagcactataaaagccactccacag
caaagtcagaaaatggaaccagatagctacatgggatattccatggctgtagctagaacc
cgttttcgtcagctcacgatattaggagctccaagatttaaccacactgggcgagtggtg
gtgttctactccaatgaaaagccaatagaagccaatgaaaagccaatagaattttcagga
cagattggtgcttattttggcgcagaaatctgtgtggtggatttagaaaatgatttctat
acggatcttgtcctcatatctgctccaatgttcaaagacaaagacagagagggcctggtc
tttgtctgtaccatcaacaccttgtttgagttggtctgtacatttaatgctgagatgaca
ctgaagggagctgcaggaattattggccgatttggaacttctcttgccccactccctgat
ctgaatgtggatggtttcaatgatctagctgttggagcacctctggaaaacaatggccaa
ggaagcgtctacatattccatgggtcaagtaatggaatacgccaaatctattctcagaga
atttcaggctcagatgtacagtctggtttaatgttttttggattgtctatcagcccgtct
tctttggacatgagcttagactctctcccagacttggctgtgggatctaagggtgctgtc
atcatactcaggtcaaggcctatagtaacagttacaacagaagtgttcttcagcccatcc
aaaatctccacaaagtcttcaagttgcaatactcctcataaaaacactgctaaagtctgt
ttcaccatgaccaaaaaaacagcagaagctacaaaaggtcaagcaagggttaattatact
ttgaccctggatgtgactcgccaagctccaaactatcgtgcttattataacagccaagat
aagataaggaagaaaactgaaactgtcaccttgacaaatgagaggatgtgcttcaaccag
cccttcttaattatgggttgcccagatgacgccctaaatgaattgtccaatgaacttgat
ttcacatttgaagggattcaattttctggagggctcagtccaagtctttccccacagtct
cggactacctcatatcatccattaggttttgagatcaactgtggaactgataacaactgt
gttgacaacctgaaagtggattttaatttcactggatccttagagatgaaagtgggcata
gatgatgtactaaatgtgacagtgtcagttgagagcctggaagaaaactcttacaacagt
cgtgtcattgtcacttaccctgcaggactgtcatttaggaagttcaccacaatccaagga
agagtggagtgtaactccatggacagtgagcatggtgtgacaccaggacagagtgactgc
gtcattaacaagcccatcttcagaagcaattccaaggctgtctttgtcctttcctatgga
atagacagcaaccgtcagtttgaacaaatggtgactttcactgcaaatgcttcaagtgga
aataatgcacactctctgagcagtgaacttttcagagagaagaaaattggtgtgaaatac
agcatatatgttttgatcacaagaggtgaggattcaactcagtacattaacttcactgcc
gggaaaaatgatttgcagaaacatgtgaaacaatcatttgtggttgtgaattatgtaaga
gattttaatcttactgtgataatcaaggtgccaatgaaacttggagacaaaagtatttgg
gctgatcaaaacagcatacagattccaggttgtcatagagacaagaatgagggaccaatt
tccacagactttgtttacaaactgaagaaagattctattttggactgctctgttgcaacc
tgtggggtgttcatgtgcaatgtcttcataagaaaagatgctcacaactctttcaacatt
tctggcaatctcagctctggatggatagaacagattggtcttgagtctgcccaattcagc
ttggtcagcacagccactcttgattacgacaggaaccaatacatctatttttcttcagac
tcaaaaaacaacccacatggccagacgattgaaactcaggtggaggtctacactgaggtt
aacttcacaaaggagattattggtggtgctgtgggtggtctgttcctgttagctttgatc
actgctgggctgtataaggctggatttttcaagagtcattacaagcagatgatgaaagat
gcatcaggtgatatgccagggaatgatggagaagctgccctggctgaataa
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