Esox lucius (northern pike): 105024451
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Entry
105024451 CDS
T04894
Name
(RefSeq) sorting nexin-27 isoform X1
KO
K17936
sorting nexin-27
Organism
els
Esox lucius (northern pike)
Brite
KEGG Orthology (KO) [BR:
els00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
els04131
]
105024451
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
els04990
]
105024451
Membrane trafficking [BR:
els04131
]
Protein recycling
Others
Others
105024451
Domain-containing proteins not elsewhere classified [BR:
els04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
105024451
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PX
PDZ
RA
PDZ_6
SNX17-27-31_F1_FERM
RA_2
SNX17-31_F2_FERM
USP7_C2
PDZ_2
SNX17_FERM_C
DarA_N
RA_3
Motif
Other DBs
NCBI-GeneID:
105024451
NCBI-ProteinID:
XP_010892706
UniProt:
A0A3P8Y658
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All DBs
Position
LG20:17401530..17415802
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AA seq
568 aa
AA seq
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MADVEGEVIRSAAPPLVSSSRNGSSGCPTQVTGSCQTVTTVTSGPRLVRIVKSDSGYGFN
VRGQVSEGGQLRSINGELYAPLQHVSAVLPGGAADRAGISKGDRILEVNSVNVEGATHKQ
VVDLIRAGEKELVLAVLSVPPQEADCLDPGDDGSAQSCYDYSDKQAVPISVPTYKHIELN
QERFVVYNVYMAGRQLCSKRYREFAILNQNLKREFANYTFPKLPGKWPFSLSEQQLDSRR
RGLEEYLERVCSVRVIGESDIMQEFLSESDENYNGVSDVELRIAMPDKTTVTVRVRKNCT
TDQVYQAVVMKVGVDSITASYFALFEVINHSFVRKLAPNEFPHKLYVQNYTSVVPGTCLT
VRKWLFTTEEEILLNDNQLAINYCFHQAVDDVKKGFIKVEEKSYQLQKLAEQKKMAMYLS
VLRGCDGYNEIIFPHCSCDSRRKGHVITAISIHHFKLHACTEEGTLENQVIAFEWVEMQR
WDTDEEGMAFCLEYTRGEKKPRWVKIFTPYFNYMHECFERVFCELKWRKELEEEAVDMNN
KNCSKDEYLPAVETQKGWRDLTGEIITS
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgtcgagggagaggtaattcgttcggcggcacctccgttggtttcatcctct
cgaaacggctcaagtggatgcccaacgcaggtcactggcagttgccaaacggtgactacg
gttacttctggtcctagactggtgcggatagtcaaatctgactcgggatatggattcaat
gtccgaggacaggttagcgaaggagggcaactacggagcatcaacggcgaattatatgcc
ccgctacagcacgttagtgctgttttaccgggtggagcagcggacagagccggcatctcc
aaaggggatcggattctggaagttaacagtgttaacgtggagggggctacccataagcag
gtagtggatctgattcgggctggcgagaaggagctggtactggctgtgctttccgtgcct
ccgcaggaggcagactgcctggacccaggagacgacggctcggcccagtcttgttacgac
tatagcgacaagcaggccgttcccatctccgtccccacatacaaacacattgaactaaac
caggagaggtttgtggtctataatgtctacatggcaggcagacagctgtgctccaagcgg
tacagggagtttgctatcctcaaccagaacctgaagagggagtttgccaactacaccttt
cccaaactacccggcaaatggcccttctccctgtctgaacaacagctagacagccgacgc
aggggactggaggagtacctggagagagtgtgttcggtgagggtgatcggagagagtgac
atcatgcaagagtttctttctgagtctgatgagaactataatggagtatcagatgtggag
ttaaggatagccatgcctgataaaaccacggtcaccgtcagagtccgcaagaactgtact
actgaccaggtctaccaggcagtggtcatgaaagtaggagtggacagcatcacagccagc
tactttgctctgtttgaggtcatcaaccactcctttgtgcgtaagctggctccaaatgag
tttcctcacaagctgtatgttcagaattacacgtctgttgtccctgggacctgtctcacc
gtccgcaagtggctcttcaccactgaggaggagatcttactgaatgacaaccagctggcc
atcaactactgcttccaccaggctgtagatgacgtgaagaagggcttcatcaaggtggag
gaaaaatcctaccagctccagaaactagcagaacagaagaaaatggccatgtatctcagt
gtgttacggggctgcgatggatacaacgagatcatcttcccccactgttcctgtgactcc
cgacgcaaaggtcatgtaatcacggccatcagcatacaccacttcaaactgcacgcctgc
accgaggaggggactctagagaaccaggttattgcgtttgagtgggtggagatgcagcgc
tgggacaccgatgaggagggcatggccttctgcctggagtacaccaggggggagaagaaa
cctcgctgggttaagatcttcaccccctatttcaactacatgcacgagtgctttgagaga
gtcttctgtgaactcaaatggaggaaagagctggaagaggaggctgtggatatgaacaac
aagaactgcagtaaagatgaatatcttccagctgttgagacacagaagggatggcgggac
ctaacaggagagatcatcacctcctaa
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