Esox lucius (northern pike): 105024716
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Entry
105024716 CDS
T04894
Name
(RefSeq) TATA-box-binding protein isoform X1
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
els
Esox lucius (northern pike)
Pathway
els03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
els00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
105024716
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
els03000
]
105024716
03021 Transcription machinery [BR:
els03021
]
105024716
Transcription factors [BR:
els03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
105024716
Transcription machinery [BR:
els03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
105024716
RNA polymerase III system
TFIIIB
105024716
RNA polymerase I system
SL1/TIF-1B
105024716
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TBP
Motif
Other DBs
NCBI-GeneID:
105024716
NCBI-ProteinID:
XP_010893112
UniProt:
A0AAY5KRL1
LinkDB
All DBs
Position
LG15:24119245..24124142
Genome browser
AA seq
310 aa
AA seq
DB search
MDEGSALERYFDEPIETTQADSGFLFEGDLGLQGTPQLQNSSFLSTLSQPEKDIGEDLDL
SFLPDDLPEESRGNAANVTQDSGLFDADRSEDFETDSNNAMPGTSTFCPMTPMTPLAPVA
ESSGIIPILQNIVSTVNLACPLDLKSIALQARNAEYNPKRFAAVIMRIREPRTTALIFSS
GKMVCTGAKSEDQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVCFPIRLEGLVLT
HQQFSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLTGFTMSLKWGCNMHLLYLGKYTNF
RETFWLNIGT
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atggatgaaggttcagcattggagcgttattttgatgagccaattgaaactacacaagct
gattctggcttcctgtttgaaggagacctgggcttgcaaggcacccctcagcttcagaac
tcatcattcctgtccaccttgagccaaccagagaaggacattggggaagatttagatctc
agcttcctccccgatgacctgccagaagagtccagaggaaatgctgctaacgtgacccaa
gacagtggcttgtttgatgccgataggtctgaggactttgagactgactctaacaacgcc
atgccggggacctctaccttctgccccatgacccctatgacccccttggccccagtggca
gagagttctggaatcatccccattttacagaatattgtatccacagtgaatctggcctgc
ccgctggacctaaaatccatcgctcttcaagccagaaatgctgaatacaaccccaagcgt
tttgctgctgtcattatgagaatacgggagcctaggaccacagcgcttattttcagctct
ggaaagatggtctgcacgggagctaagagcgaggaccagtcgcggctagccgcccgcaag
tatgcccgagtggtgcagaagctgggctttcccgctaaattcctggacttcaagatccag
aacatggtggggagctgtgacgtctgctttcccatccggctggagggtctggtgctaact
catcagcaattcagcagctatgagccagagttgtttcctgggttgatctaccgcatggtg
aaaccacgtattgtgttactgatctttgtgtccggaaaagtggttcttaccggtttcaca
atgtccctgaaatggggctgtaatatgcacctgctgtacctgggaaagtacaccaatttc
agggaaactttttggctcaacattggaacttaa
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