Esox lucius (northern pike): 105025256
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Entry
105025256 CDS
T04894
Symbol
xpc
Name
(RefSeq) DNA repair protein complementing XP-C cells isoform X1
KO
K10838
xeroderma pigmentosum group C-complementing protein
Organism
els
Esox lucius (northern pike)
Pathway
els03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
els00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
105025256 (xpc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
els03400
]
105025256 (xpc)
DNA repair and recombination proteins [BR:
els03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
105025256 (xpc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BHD_3
Rad4
BHD_1
BHD_2
Motif
Other DBs
NCBI-GeneID:
105025256
NCBI-ProteinID:
XP_010894117
UniProt:
A0AAY5L4X7
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Position
LG12:complement(32880279..32890894)
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AA seq
931 aa
AA seq
DB search
MAKSKKSADTAVKTDTKKLKQVKGKTRGSARAKKDQENGEETEKIQRKAKTKSRPYKPIA
ERTKSSKYFQDNTPVKGVPADVIPAFISTRNDTVMFPKNKEDDDDSEEDDDSEEDDDSEE
DDDWEEVEELAEPLGSVEPLEPALPSQPVEIEIETPDILLKRQRREKRKTEFETYLRRMM
NRFNKDVVEDTHKVHLMCLLANGMFRNQLCSTPDLLAITLSLLPTHFNMVAKERIDANYL
SGLLKWFETTFTLNPNLSCEEKLDPQALLESRLGSLTARDHQEMTHEGQRLDTGQGFRAL
VGILWTKQVVRWVKLFLLVLRSLQLFCRLVLSLQPLSLKAPSAKSKAKTSGSLPGKSPSQ
KKPAKENRSEHKVSPGTKRPAAGTGQRGAKKSKIKEADPELGVSSGQKPKNSKRRSVASK
VSYKEESSEGEGPSDGDEFQPTTEENSEDSEGAAKPIRCEKGKGGKSQAKMSDPRRGGGK
KKVKSEEEGDEDWEGGEEGEAEEVKGGRRKGEKGADEWLEVYLEKTGCWVCVDVMQGVGQ
PQLCARQATHPMTYVVAVDGDGHLKDLGSKYDPTWMTATRKRRVDEEWWEETLGPFLSPE
SERDIQEDKELQARLLDKPLPTSIAEFKNHPLYALKRHLLKYEALYPPTAATLGYCRGEP
VYSRDCIHTLHSRDAWLKEARTVRLGEEPYKMVRGFSNRSRKARIASEQKEKDDLPLFGE
WQTEEYQPPVAVDGRVPRNDFGNVYLFKPCMLPLGCVHLRLPNLHRVAKKLGMDCALAVT
GFDFHSGYSHAVTDGYIVCEEHEEILRAAWVEDQEIQKQKEKEKREKRALSNWTLLVKGL
LIRERLHRRYGKKGPTAGGGLEELKRQNREGEDGLSSEEEGEGGPNTAAATLAQAWPQNR
QEVQDSGTGAPPKKSKQEKRGQQKHLFPFEK
NT seq
2796 nt
NT seq
+upstream
nt +downstream
nt
atggccaagtcaaaaaagtcagcagacacggcagtgaagaccgatacaaagaaattgaag
caggtgaagggtaaaacccgaggatcagcaagagccaaaaaagaccaagagaatggagaa
gaaacggagaagattcagagaaaagccaagaccaaatcccgtccctataaacctatagcg
gaaagaaccaaatccagcaaatacttccaggacaatactccagtgaagggggtacctgct
gatgtcatccccgctttcatcagtaccagaaatgacactgtgatgtttcctaaaaacaaa
gaggatgatgatgacagtgaggaggatgatgacagtgaggaggatgatgacagtgaggag
gatgatgactgggaggaagtggaagagctggctgagccgttggggtcagtagagccatta
gagccagcccttccctcacagcctgtggagatagaaattgagaccccagacatccttctc
aaaaggcagagaagggagaagaggaagactgagtttgagacctacctgcgacgcatgatg
aaccgctttaacaaagatgtggttgaggacacacacaaggtccacctcatgtgtcttcta
gccaatggcatgttccggaaccagttgtgcagtacaccagacctgctagctatcaccttg
tctctgttgcccacccacttcaatatggtggccaaggaacgcatcgacgccaattacctc
tctggcctgcttaagtggtttgagacaacattcactctaaacccaaatctttcctgtgag
gagaagctggacccacaggccttacttgagagtagactgggcagccttaccgctagagac
caccaagaaatgacacacgagggacagagattggacaccggacaaggatttagggccctg
gtgggcattttatggacaaaacaagtagtgagatgggtgaaactgtttctgttggtgttg
aggtcattacagctcttctgtcgactggtcctctctcttcagcccctgtcactcaaggcc
ccatcagccaagagcaaggcaaagacctcaggcagcctacctgggaagagtccctcacag
aagaaacctgccaaagagaaccgctcagagcacaaagtctctccagggaccaaaagacca
gctgcggggacaggccaaagaggggcgaagaagtcaaaaattaaggaggcggatccagaa
ttaggtgtttcgtcgggacagaaacctaagaactccaagcgccgcagcgtcgcttcgaag
gtaagctacaaagaggagagcagtgaaggggaggggcccagtgacggggacgagttccaa
ccgaccactgaggagaacagcgaggactctgagggagcagccaaacccatcagatgcgag
aaagggaaaggaggcaagagccaggccaagatgtcagatccacggcgcgggggcggcaag
aagaaagtcaagagcgaagaggagggggatgaggattgggaggggggtgaggagggggag
gcagaggaagtaaaggggggtaggaggaagggggagaagggggcagacgagtggttggag
gtgtacttggaaaagaccgggtgctgggtgtgcgtggatgtgatgcagggggttgggcag
ccccagctgtgcgccagacaagccacccaccccatgacctatgtggtagctgtggacggg
gatggtcacctgaaggacctgggcagcaagtacgaccccacctggatgaccgccaccaga
aagagaagggtggacgaggagtggtgggaggagacgctagggcccttcctcagtcctgaa
tccgagagggacatccaggaggacaaagagcttcaggctaggttgctggataagccattg
cccacatctatagcagagttcaaaaaccaccccctgtacgcccttaagagacatctactg
aagtatgaagctctctacccccccacggcggccaccctggggtactgcaggggagagcca
gtctattccagggactgtattcacacgctacactccagagacgcctggctgaaagaggcc
cgaactgtccgtctaggagaggagccctacaagatggtcagagggttttccaatcgctct
cggaaggccaggatcgcatcagagcagaaagaaaaagatgacctgcctctgtttggtgaa
tggcagacagaggaataccaaccaccagtagctgtagatggacgggtgcctcgtaatgac
tttggcaatgtgtacctgttcaagccctgcatgctgcccttgggctgtgtccacctgcgt
ctgccaaacctgcacagagtggctaagaagctgggcatggactgtgccctcgccgtcact
ggctttgacttccacagcggctactctcatgctgtaactgatggctacattgtgtgcgag
gagcacgaggagatccttagagcagcttgggtggaagatcaagagatccaaaaacaaaag
gagaaagagaagcgggaaaagagagctctatctaactggactctgctagtgaagggcctg
ctgatcagggagagactccatagacgctatgggaagaaaggcccaacagccggaggaggc
ctggaggaactgaagagacagaatcgggaaggagaggatggcctgtcctctgaggaggag
ggggaaggtgggccaaacacagctgctgccacactggcacaggcctggccccagaacaga
caggaggtgcaggacagtggcacaggagccccccccaaaaaatccaaacaagagaaaaga
ggccagcagaagcacctttttccctttgaaaaatga
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