Esox lucius (northern pike): 105025569
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Entry
105025569 CDS
T04894
Symbol
thoc5
Name
(RefSeq) THO complex subunit 5 homolog
KO
K13174
THO complex subunit 5
Organism
els
Esox lucius (northern pike)
Pathway
els03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
els00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
105025569 (thoc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
els03019
]
105025569 (thoc5)
03041 Spliceosome [BR:
els03041
]
105025569 (thoc5)
Messenger RNA biogenesis [BR:
els03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
105025569 (thoc5)
Spliceosome [BR:
els03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
105025569 (thoc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FmiP_Thoc5
Motif
Other DBs
NCBI-GeneID:
105025569
NCBI-ProteinID:
XP_012992298
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All DBs
Position
LG13:complement(18774316..18783631)
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AA seq
683 aa
AA seq
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MSDALKKRKSKVVRSETGTPEGKRGRGDGEQEVRVYSEEVELDGSDPAEDYRQYKLTCKA
LAKLMNEIQELKANGAKDGCAEVEQKRMQSCIHFMSLKKLNRLAHMRLKRGRDQTHEGKQ
RVDVLHLQLQNLLYEVMHMQKEISKCLEFKSKHEEIDLVSIDEFNKEAPPEISRISITKD
DPHQLTLARLDWELEQRKRLAEKYKESLSSKEKIQKSIEVKKEHLSSLQPGLNAIMQASL
PVQEYLSMPFEQTQKQIEIARHLPPSLYVLLVQANAYGQACDKSLSVSISGDVDEAKALA
KPPDDSQDDDSGDSDAEEEQEKTKRRRPTTGGQLDDKRREMLKRHPLSLCLDLKCKDGSV
LHLFFYYLMNLNIMTVKAKVSTATDLTGAISAGELLNSDTLLNCLYANDQGRETPNPANR
YQFDKVGISVFGDYVAELGHPYQWVQRLGGLQFPSETPEGLRAGSSLSASHMESTMKLLR
GRVQSRLALHKQFSSLEHSIVPVSSECQHLFPTKVLSRLSRWTAITHHEYINLSFTRHVS
DAGLARETDLFFLAVVERGTARLQAAVVLNPRYPEISPLFALSLSWKGERAGRSDDNLRA
IESEVNVFKSELQGPRPGHQLLTNQVARLCVCLDVYLETDGQDDSVEGPREFPREKMCLR
TARGPNRLKPFKYNHPQGFFSHR
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacgctctgaagaaacgcaagtccaaggtggtgcgcagcgagacgggcactccg
gagggaaaacgcggccgaggagatggagaacaggaagttcgtgtgtacagtgaagaagtg
gaattggatggcagtgacccagcagaggactaccgacagtataaactgacctgtaaagct
ctggccaaactgatgaatgaaatccaagagctgaaagccaacggagccaaggatgggtgt
gccgaggtggagcagaaaaggatgcagagctgtatccacttcatgagtctgaagaaactc
aaccgcctggctcacatgagactgaagagagggagagaccagacacatgagggcaagcag
agagttgatgtgttgcacctgcagctccagaacctgctctatgaggtcatgcacatgcaa
aaggagatcagcaagtgtctggagttcaagtctaagcatgaggagatagacctggtgagt
atagatgagttcaacaaggaggctccccctgagatctcccgcatctccatcaccaaggac
gatccccatcaactaacactggccaggctggactgggagctggagcagagaaagaggctg
gctgagaagtacaaagagtctttgtccagtaaggagaagatccagaagagtattgaggtg
aaaaaagaacacctgagttcccttcagcctggacttaatgctatcatgcaggcatccctc
ccggtccaggaatacctctctatgccgtttgaacagacccagaaacagatagagattgcc
cgccacctccccccctctctctatgtcctcctggttcaggccaatgcttacggacaagcc
tgcgataagagcctgagtgtgtccatcagtggagatgtggatgaggccaaagccctggct
aaacctccagacgactcccaggatgatgattccggtgattctgatgcggaggaggagcag
gagaaaacgaagagaaggagacctacaacaggaggtcagttggatgataagagacgtgag
atgctgaagagacaccctctctccctctgcctggacctcaaatgcaaagacggcagcgtg
ctgcatctgttcttttactacctaatgaacttgaacatcatgactgtcaaggccaaggtc
tccaccgccacagacctcactggagctattagcgcaggggagctgttgaactctgacacg
ctgctcaactgcctgtacgccaacgaccagggccgcgagactcccaacccagccaaccgc
taccagtttgataaagtcgggatcagtgtgtttggagactatgtggcagagctgggtcat
ccctaccagtgggttcagaggctgggaggactgcagttccccagtgaaaccccagaggga
ttgcgtgctggcagttctctaagtgccagtcacatggagagcaccatgaagctgctaaga
gggagagtccagtcacgcctggccctgcacaaacagttctcctccttagaacatagtatt
gttccagtgtccagtgagtgccagcacctgttccctactaaggttctgtctcggctgtct
cgctggactgccattacacaccacgagtacattaatctgtccttcacacgccatgtgtca
gatgccggtctggctcgggagactgatctgttcttcctggccgtggtggagagaggaaca
gctcgtcttcaagctgcagtggtgctgaatcctcgttaccccgaaatctctcctctgttt
gctctgtctctcagctggaagggcgagcgcgcgggacgttctgatgacaacctccgggcc
atagagagtgaggtgaacgtgtttaaatcggagctccaagggccccgccctggccatcag
ctgttgaccaatcaggtggctcgtctctgtgtctgtctggatgtgtacctggagactgac
ggacaggacgacagcgtggagggaccgcgggagtttcccagagagaaaatgtgtctgcgc
acagccagggggcccaatcgtctgaagccgttcaagtacaaccacccccagggcttcttc
agtcaccgctga
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