Esox lucius (northern pike): 105025629
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Entry
105025629 CDS
T04894
Symbol
atg4b
Name
(RefSeq) cysteine protease ATG4B isoform X1
KO
K08342
cysteine protease ATG4 [EC:3.4.22.-]
Organism
els
Esox lucius (northern pike)
Pathway
els04136
Autophagy - other
els04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
els00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
105025629 (atg4b)
04136 Autophagy - other
105025629 (atg4b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
els01002
]
105025629 (atg4b)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
els04131
]
105025629 (atg4b)
03029 Mitochondrial biogenesis [BR:
els03029
]
105025629 (atg4b)
Peptidases and inhibitors [BR:
els01002
]
Cysteine peptidases
Family C54: Aut2 peptidase family
105025629 (atg4b)
Membrane trafficking [BR:
els04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
105025629 (atg4b)
Mitochondrial biogenesis [BR:
els03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
105025629 (atg4b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C54
ATG4_LIR
Motif
Other DBs
NCBI-GeneID:
105025629
NCBI-ProteinID:
XP_010894737
UniProt:
A0AAY5KFJ5
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All DBs
Position
LG08:complement(5723950..5731106)
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AA seq
397 aa
AA seq
DB search
MDAATLTYDTLRFGEFEDFPETSDPVWILGKEFNALTEKEDIFSDVTSRLWLTYRKNFPP
IGGTGPTSDTGWGCMLRCGQMILGEALICRHLGRDWRWVRGQPQKEEYISILNAFLDKKD
SYYSLHQIAQMGVGEGKSIGQWYGPNTVAQVLKKLAVFDSWSRLAVHVAMDNTVVIEEIK
RLCMPWLDYGGGACADPQGGMSEPNGCLEGACALAEEETALWKPLVLLIPLRLGLSDINE
AYIETLKQCFQLPQSLGVIGGKPNSAHYFIGYVGEELIYLDPHTTQPAVEPGEDGQVPDD
TYHCQHPPCRMHICQIDPSIAVGFFCRTEDDFDDWCARVRKLSHSRGGLPMFELADRQPS
HFSCSVDVLNLAPDFFDSDRLERFFDSEDEEFEILSL
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atggatgcagctactctcacatacgacacacttcgctttggagagtttgaagatttccca
gagacctcagaccctgtgtggatcttagggaaagaattcaatgcactaacagagaaggaa
gatattttctcagatgtcacttcacgactatggttgacttacaggaaaaacttcccaccc
attggagggaccggccctacgtctgacacaggctggggctgcatgctccgatgcggacag
atgatcttaggagaggccctgatttgtaggcatctgggaagagactggagatgggtgaga
ggccagccacagaaagaagagtacatcagtatcctcaacgctttccttgacaagaaagac
agctactattccttacaccaaattgcccagatgggagttggtgaagggaaatctataggg
cagtggtatggacctaacacagtggcacaggtactcaagaaactggcagtgttcgactca
tggagccgtttggctgttcatgttgccatggacaacactgtggtaattgaggagatcaag
aggttgtgtatgccctggctggactacgggggaggagcgtgtgcggacccccagggtggg
atgtcggagcccaacggctgcctggagggggcctgtgccctggctgaggaggagacggct
ctctggaagcccctggttcttctcatccccctgagactgggcctgagcgatatcaacgag
gcctacatcgagaccctgaagcagtgcttccagctgcctcagtctttgggtgtcattgga
gggaaacccaacagtgcccattactttataggatatgttggggaggagctgatctatctg
gatccccacaccacccagccagcggtggagcccggtgaggacggccaggtcccggacgac
acctaccactgtcagcacccaccctgccgcatgcacatctgtcagattgacccctccata
gcagtgggtttcttctgcagaacggaggacgacttcgacgactggtgtgcgcgcgttaga
aagttgtcccactctagaggaggcctgcccatgtttgaactggctgaccgtcaaccatcc
cacttctcctgctccgtggacgttttgaacctcgcgcctgatttctttgattccgatagg
ttggagaggttctttgattctgaggacgaggagtttgagatcctgtccctgtga
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integrated database retrieval system
