Esox lucius (northern pike): 105025692
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Entry
105025692 CDS
T04894
Symbol
tpm1
Name
(RefSeq) tropomyosin alpha-1 chain isoform X1
KO
K10373
tropomyosin 1
Organism
els
Esox lucius (northern pike)
Pathway
els04260
Cardiac muscle contraction
els04261
Adrenergic signaling in cardiomyocytes
els04814
Motor proteins
els04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
els00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
105025692 (tpm1)
04820 Cytoskeleton in muscle cells
105025692 (tpm1)
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
105025692 (tpm1)
04261 Adrenergic signaling in cardiomyocytes
105025692 (tpm1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
els04812
]
105025692 (tpm1)
04147 Exosome [BR:
els04147
]
105025692 (tpm1)
Cytoskeleton proteins [BR:
els04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Tropomyosins
105025692 (tpm1)
Exosome [BR:
els04147
]
Exosomal proteins
Exosomal proteins of microglial cells
105025692 (tpm1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tropomyosin
Laminin_II
CLZ
TMF_DNA_bd
DUF745
ATG16
Crescentin
CENP-F_leu_zip
Lebercilin
DUF3450
PUMA_CC
DUF16
SlyX
FPP
Laminin_I
AAA_13
DUF1664
Fez1
Motif
Other DBs
NCBI-GeneID:
105025692
NCBI-ProteinID:
XP_010894859
UniProt:
A0A3P8YQP7
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Position
LG19:complement(23036807..23049297)
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AA seq
284 aa
AA seq
DB search
MDAIKKKMQMLKLDKENALDRAEQAEGDKKAAEDKSKQLEDDLVALQKKLKGTEDELDKY
SESLKDAQEKLELAEKKATDAEADVASLNRRIQLVEEELDRAQERLATALTKLEEAEKAA
DESERGMKVIENRASKDEEKLELQEIQLKEAKHIAEEADRKYEEVARKLVIIESDLERTE
ERAELSEGKCSELEEELKTVTNNLKSLEAQAEKYSQKEDKYEEEIKVLTDKLKEAETRAE
FAERSVAKLEKTIDDLEDELYAQKLKYKAISEELDHALNDMTSI
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atggatgccatcaagaagaagatgcagatgctcaagctcgacaaggagaatgccttggac
agagctgagcaagctgagggagacaagaaggcagcagaggacaagagcaaacagcttgag
gatgacttggtagctctgcagaagaaactgaagggaacagaggatgagctggacaagtac
tcagagtctcttaaggatgcccaggagaaacttgagctggctgagaagaaagccaccgac
gctgaggccgatgtcgcttccctgaacagacgtatccagctggttgaggaggagttggac
cgtgctcaggagcgcctggcaaccgccctgaccaagctcgaggaggctgagaaggctgct
gatgagtccgagagaggcatgaaggttattgagaacagggcctcaaaggatgaggagaag
ttggagctgcaggagatccagctgaaggaggccaagcacatcgctgaggaggctgaccgc
aaatatgaggaggttgcccgtaagctcgtcatcattgagagtgatctggagcgtacagag
gagcgtgctgagctttcagaaggcaaatgctctgaacttgaggaagagttgaaaactgtg
accaacaacctgaagtcactggaggcccaggctgagaagtactcacagaaggaggataag
tacgaggaggagatcaaggtcctcactgacaagctgaaggaggctgaaactcgtgctgag
ttcgctgagagatcagtagccaagcttgagaagaccattgatgacttggaagatgagttg
tatgcccagaaactgaagtacaaggcaatcagcgaggagctggaccacgccctcaacgac
atgacctccatataa
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