Esox lucius (northern pike): 105025878
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Entry
105025878 CDS
T04894
Name
(RefSeq) CCR4-NOT transcription complex subunit 3 isoform X1
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
els
Esox lucius (northern pike)
Pathway
els03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
els00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
105025878
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
els03019
]
105025878
Messenger RNA biogenesis [BR:
els03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
105025878
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
105025878
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
105025878
NCBI-ProteinID:
XP_010895200
UniProt:
A0A3P8Z3J5
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Position
LG10:complement(21887068..21903611)
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AA seq
948 aa
AA seq
DB search
MADKRKLQGEIDRCLKKVAEGVEQFEDIWQKLHNAANANQKEKYEADLKKEIKKLQRLRD
QIKTWVASNEIKDKRQLVENRKLIETQMERFKIVERETKTKAYSKEGLGLAQKVDPAQRE
KEEVGNWLTNTIDTLNMQVDQFESEVESLSVQTRKKKGDKEKQDRIEELKRFIEKHRYHI
RMLETILRMLDNDTLQVESIRKIKDDVEYYMDSSQYPDFEENEFLYDDLDLEELPTSPSV
SPNPSLVSLAGSLVATSPPGQSLLDDDIFQQISSGTPTSTTSSSPIPPSPATCTTENSED
DKKRGRSTDSEVGQSPVKNGNPSSSLSSSSSSSSSSSSSSASGASSSSLVSMATVAGGGV
PVTGGNHNSLLGNMGGLLSNSGSYSNATQQHHHHPHHQLQQHHHQTPQARSSVISSNIPS
NPSPSNNLLLPSPSASSPPNSGTNPPPLTPNSQAPSRPLTASGMGLGLGLGLGKGGMTGS
PAVSQMSGLGLSAMQASLSTMSGLLAGSTSAPYATAAAGSGTIGSPLAGKMGLAGTGGTN
SNTVGPVGGNSIGDRSTGLLGSAPSAIGVSGGILGLGALGSGQSGIQGTPLAAPSPLGGG
LTPGSSLGAIGSMGGNSSGAQSVSSGIGGGSTAITRPPSGQKQNGSTSYSAVVADSTSDS
ALNSSGQSQSSQPSSMTSASNQPKDSGPSLLGSMTLTSSSPSPSYSESKPSGGSLLNGPL
SYTQASESMKPQEPLGTLKSMAERAALGSGMEGEMPSLHLTSDMFPSTTTAQGPASAPQQ
PSLSEVSIPPSLGVCPLGPVPLSKDQLYQQAMQESAWTHMPHPSDSERIRQYLMRNPCPT
LPFHHQVPPPHSDSVDFYQRLSTETLFFIFYYLEGTKAQYLAAKALKKQSWRFHTKYMMW
FQRHEEPKTITDEFEQGTYIYFDYEKWGQRKKEGFTFEYRYLEDRDLQ
NT seq
2847 nt
NT seq
+upstream
nt +downstream
nt
atggctgataaaagaaaacttcaaggtgaaatagatcgatgtttgaaaaaagtagcggaa
ggcgtggaacaatttgaagacatttggcaaaagcttcataatgcagccaacgctaaccag
aaggagaagtatgaagctgacctcaagaaagagattaagaaactgcagcgtctccgggac
cagatcaagacgtgggtggcctccaacgagatcaaagacaaaaggcagctagtggagaat
cgcaaactcattgagacgcaaatggagcggttcaagattgtggagcgagagaccaagaca
aaggcttactcgaaagagggcctgggccttgcacaaaaggtggacccggcccaaagggag
aaggaagaggtcggcaactggctaacgaacacaatcgatacactgaacatgcaggtggac
cagtttgaaagcgaggtggagtccctctcggtccaaacccggaagaagaagggagacaaa
gagaaacaggaccggatcgaggagctgaagcgcttcattgagaagcaccggtaccacatc
cggatgctggagaccatcctgcgcatgctggacaacgacacgctgcaggtggagtccatc
cgcaagatcaaggacgacgtggagtattacatggactcgtcgcaataccccgacttcgag
gagaacgagttcctctacgacgacctggatctcgaggagctacctacctctccctctgtc
tcccccaatccatctcttgtctctctagccgggtcactggtggccacctccccgccgggc
cagtcgctcctggacgacgacatcttccagcagatctccagcggcacgcccacctctaca
acctcctcctcacccatccccccctcccccgccacctgcactacggagaactctgaagat
gacaagaaaagaggacgttccacagacagtgaagttggtcagtcgcccgtcaagaacggc
aatccctcttcctcgttatcctcttcgtcctcttcgtcctcgtcatcctcgtcgtcctct
gcctcgggagcctcctcgtcctcactggtctctatggcgactgtcgccgggggcggagtg
cccgtcaccggaggcaaccacaacagccttctgggcaacatggggggtctcctctccaat
tccggcagctacagcaacgccacccagcagcatcatcatcatcctcatcaccagctgcag
cagcaccaccaccaaacaccgcaggcccggagttccgtcatctcctccaacatcccctcc
aaccccagcccatcgaacaacctcctcctgcccagcccctccgcctcctcgccccctaac
tccggcacaaaccccccgccgctcacgcccaactcccaggctccatcgaggcccttgacg
gcctccggcatgggcctgggcttgggtctgggcctcggcaaaggcgggatgacggggtcg
ccggctgtcagccagatgtcgggacttggcctgtcggcgatgcaggcatccctgagcacc
atgtccgggctactggcgggctccacttcagccccttatgccacggcggcagccggctcc
ggaaccatcggtagtcccctggcagggaaaatgggcttggctggtactggtggcaccaac
tctaacacagtggggccggtgggcgggaacagcatcggcgaccgatccactggcctgcta
ggctccgcgcccagcgcaatcggcgtcagcggcggcatcctgggcctcggcgccctcggc
tcagggcagtcggggatccagggtactcccctggcggcccccagccccctcggcggagga
ctgacccctggaagcagcctaggcgccatcgggagcatgggaggcaacagttccggagca
caaagcgtctccagcggcatcgggggagggagcacagcgatcacgaggcctcccagtgga
cagaagcagaatggtagcactagttacagtgctgtagtagcagacagcacatccgattcc
gcccttaacagttccggccaatcgcagagcagccagccatcgtctatgacctccgcatcc
aatcagccgaaagacagtggacccagtcttttaggatccatgactcttacctccagctct
ccatcaccgtcatacagcgagagtaagccttcagggggcagtctgctcaacgggcccctc
tcctacacacaggcctccgaaagcatgaagccccaggagcctctaggcactctgaaatcc
atggcagaacgtgcagcactgggctcaggaatggagggagagatgccctctttacacctc
acctcagatatgttccccagcactacaactgcccaggggcctgcttcggccccacagcag
ccctctctctcagaggtcagcatccccccgtcgctgggcgtgtgtccgctggggcccgtg
cccctgtccaaagaccagctataccaacaggccatgcaggagtcagcctggacgcacatg
ccccacccctccgactcagaaaggatcaggcagtaccttatgaggaacccgtgccccacc
ctgcctttccaccaccaggtgccgcctccccactccgactcggttgacttctaccagaga
ctgtccacagagacgctgtttttcatcttctactacctggaggggactaaggctcagtat
ctggcagccaaggctttgaaaaagcagtcgtggcggttccacacaaaatacatgatgtgg
ttccagaggcacgaggagcccaagaccatcactgatgaatttgagcaggggacctacatt
tactttgactatgagaagtggggtcagcggaagaaggaaggattcaccttcgagtatagg
taccttgaagaccgagatctccaatga
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