Esox lucius (northern pike): 105026042
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Entry
105026042 CDS
T04894
Symbol
gabra6
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-6
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
els
Esox lucius (northern pike)
Pathway
els04080
Neuroactive ligand-receptor interaction
els04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
els00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
105026042 (gabra6)
04082 Neuroactive ligand signaling
105026042 (gabra6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
els04040
]
105026042 (gabra6)
Ion channels [BR:
els04040
]
Ligand-gated channels
GABA-A
105026042 (gabra6)
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GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
CytochromB561_N
Motif
Other DBs
NCBI-GeneID:
105026042
NCBI-ProteinID:
XP_010895526
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Position
LG04:22041421..22068053
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AA seq
439 aa
AA seq
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MTLIYLILFTMICAGSVYGHESYAGENITRILDQLLDGYDNRLRPGSGGEVTEVKTDIFV
TSFGPVSDVEMEYTVDMFFRQTWVDERLQYDGAGEILRLNNKMVDRIWTPDTFFRNSRKS
TVHNMTTPNKLFRIMQNGTVLYTMRLTISAECPMNLMDFPMDGHACPLKFGSYAYTNTEI
TFTWRKGLEASVDCPQESISLLQYDLIGHKLFSETFKCNTGHYSVMIVHFLLKRKLGYYL
IQTYIPLIMVVMLSQVAFWINKESVPARTVAGITTVLTMTTLSISARQSLPKVAYATAMD
WFIAVCFAFVASALIEFAAVNYFATLQAKRLKEQKAMQKNLEVLASYDEEEDESASSPPS
ERGGVKRRYNSIAQSEIDSGPPLPYFLQSGSALPPIQALAGTSPIDQYSRILFPLAFALF
NLVYWVTYMGKDSMEQARD
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgacacttatatatctgatcttgttcactatgatctgtgctggcagtgtgtatggacat
gaaagctatgcaggtgaaaacattacccgtattttagaccaacttctagacggctatgac
aaccgcttgcgaccaggatctggaggtgaggttacagaggtaaaaacggatatctttgtc
accagctttgggcctgtgtcggatgttgaaatggagtacaccgtggacatgttctttcgt
cagacctgggtggacgagaggctgcagtacgatggcgccggggagattctgcgtctcaac
aacaagatggtggaccggatctggacacccgatactttcttcaggaactccaggaagtcc
accgtccacaacatgaccactcccaacaagctgttccgcatcatgcagaatggaacggtt
ctgtacaccatgagacttaccatctctgccgagtgtcccatgaacctcatggatttcccc
atggacggacacgcatgtcctctgaagttcggcagctacgcctacacaaacactgagatc
acctttacatggaggaaaggtctggaagcgtctgtggactgtccacaggagtctatcagt
ctgctgcagtacgacctgattggacataagctattcagtgaaacgttcaagtgcaacaca
ggtcactactctgtcatgatcgtccattttctccttaagaggaagctgggctactacctc
attcagacttacatccctctgattatggtagtgatgctgtcgcaggtagccttctggatc
aacaaagagtccgttcccgcacgcacagtggctggcatcacaacggttcttaccatgaca
acgctcagcatcagcgcccgccagtccttgccgaaggtggcatacgccacagccatggac
tggttcatcgccgtgtgtttcgccttcgtggcttctgcgctcattgagtttgcagctgtc
aactactttgctacactgcaggccaagcgtctgaaggagcaaaaggccatgcagaaaaat
ctggaagtccttgcaagttatgatgaggaagaggacgagagcgcttcatctcccccgtcg
gaaaggggcggagtgaagaggaggtacaactctatagcccagagtgagatcgacagtggc
cctccgttgccttacttcctgcaatcgggctccgctctcccccccatacaagccctggct
ggcaccagccccatagaccagtactcccgcatcttgttccctctggcctttgcgctcttt
aacctggtctactgggttacctacatgggcaaggactcgatggaacaggccagagattga
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