Esox lucius (northern pike): 105026045
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Entry
105026045 CDS
T04894
Symbol
limch1
Name
(RefSeq) LIM and calponin homology domains-containing protein 1 isoform X7
KO
K24422
LIM and calponin homology domains-containing protein 1
Organism
els
Esox lucius (northern pike)
Brite
KEGG Orthology (KO) [BR:
els00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
els04990
]
105026045 (limch1)
Domain-containing proteins not elsewhere classified [BR:
els04990
]
LIM domain-containing proteins
Other lim domain-containing proteins
105026045 (limch1)
BRITE hierarchy
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GFIT
Motif
Pfam:
DUF4757
CH
LIM
Syntaxin_2
Motif
Other DBs
NCBI-GeneID:
105026045
NCBI-ProteinID:
XP_010895524
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All DBs
Position
LG04:complement(25664012..25765548)
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AA seq
1314 aa
AA seq
DB search
MASPSADIGQPHQRHPPESASEPAFLEAQKWIEAVTGRGFCDKDFRGGLENGILLCELLS
SIKPGLVKKINRLPTPIAGLDNLSVFLRGCEELGLKGSQLFDPGDLQVASTRPNAKFADC
SRKLKNVLVTIYWLGRAANSCTSYNGPTLDLKEFEGLLSQMRKEADDTESPQRSIRDSGY
VDCWDSERSDSLSPPRHGREDSFDSLDSFGSRSRQTPSPDVPVARGIGSDGRGSDSESDA
GPHGGRKLPDIRKDDMLARRTSVSEPRVLVPFNQYLPNKSNASGYVPTPLRRKRGDREGR
EEASGGGGGSRKSWSTATSPIGGEKPFSSSPARSCSEELYRPSSLTTSSMTTSIVVTSPL
SPSPGTSRKLPPLPVVYCGEAGPKKKGMTLSLRTDTGRKDNSGTASPSQFLPVPVAVATT
TLTVACQGRTERSEVEDRKCNKPPVARRPSWLADNHPPTFSHRAASVSDGSESVSMIDMR
CEEDAILPAHSQARHELMHNQYNMLKEEEDHWQDDLARWKSRRRSVSQDLIKKEEERKMM
EKLMTGDGGATSQRRKSIKTYREIVEEKERRENELREAYRSARTPEEAAAVLHRYAQRFT
ISEAVLERLQLPKLLDRSVSDDPSAAMRLPLTPTSCPLTPASPEDDPNGPMKYLRQQSLP
APKFTATVEARVLGFPQGQSHRPQIRSRTPEPNPTARGVSTKSVPLLTPKPYIQPKGMQT
QAPARPGKVDGLLRVNGETGNDEVTTPESEGRTSPLRFYPCPDTPTASFDPFDTPPRAAT
PQPAQSPSPRASQSPAIPVDAEVGSSTSTMVPPSSVSGEGVAQESKTWESAPPSRPTSLP
VELQSAGGMVDAGGMSAAGTLEEEEPNTAEAAAKPSPATVSQQDSKGQTEVCMNAKEARP
DTPPLVQSEPTKQQAALMNAQVRQPSLASSQRPEEVAALADPGPVGNTLRCEAPTTELTD
IASYPLEPGNPRLGRRREFFTPSEGAEKELGKVAVTQVSSPIVTQAKRGDRWSWDPDEER
KRQKRWQQEQERMLQEKYRREQEKLKQEWEKAQREVEEEERRYHEEERRILEETVTPLTP
HSSALPSPIRGEAPLSMDPQDTIVRSLADWERKQELLERQGGSSESVEWKQRDNDRSSDI
STASRDDSMKTAVSSISQNSSRSDKLTPSIQNGQRVSPNTVLPNKKPQPEMLLDCTRPSQ
QTASRDRRCGSIETMAASPSKSPTTSPSDMPPSPNRSVSGKKLCSSCGNPLGKGAAMIIE
TLSLYFHIQCFKCGVCKGQLGDTSTGTDVRIRNGLLNCHQCYIRSRSAGQPTTL
NT seq
3945 nt
NT seq
+upstream
nt +downstream
nt
atggcaagtccgtctgcagatataggacagccacaccagcgacatcctcccgaatcggcc
tcggagccagcgtttctagaagcgcagaaatggattgaggcagtcacaggcagaggcttt
tgcgacaaggacttcaggggaggcctggagaatgggatcctgctgtgcgagttgttgagc
tccatcaaacctggcttggtgaagaaaatcaacagattacccactccgattgctggcctg
gacaacctgagtgtcttcctgcgtggctgtgaggagctggggctgaagggctcgcagttg
tttgaccctggggacctgcaggtcgcgtccacacgcccaaacgccaagttcgcagactgc
agcaggaagctgaagaatgttctagtaaccatatattggctgggtcgggctgccaacagc
tgcacctcctacaacgggcccacactggacctgaaggagtttgaaggcctgctgtcacag
atgcgaaaggaggcagacgacacagagagcccacaacgcagcatacgggacagcggctac
gtcgactgctgggactcagagcgcagcgattcgctctccccgccacgtcacggccgggag
gactctttcgacagcctggactcgttcggctcacgctccagacagactccctcgccggac
gtaccggtcgcccgcggcatcggcagtgatggtcgtggcagcgactcggagtccgacgct
ggaccccacgggggcaggaagctgccagacatacgcaaggacgacatgctggcacggcgg
acatctgtcagcgagccccgagtgctagtgcccttcaaccagtacctgcccaacaagagc
aatgccagtggctatgtgcccacacctctgcgacgcaagaggggtgaccgagagggccgg
gaagaggctagcggagggggcgggggcagccgcaagagctggagtaccgccacctcaccc
atagggggcgagaaaccatttagcagtagccctgcccgctcatgctctgaggagctgtac
cgcccatcgtccttgacgaccagctctatgacgacctccattgttgtgacgagtcccctc
agcccaagcccgggcactagcaggaagttacctccccttcctgtggtctactgcggggag
gcggggccaaagaagaaggggatgaccctatccttgaggacagacacaggaaggaaggat
aacagcggcaccgccagcccgagccagttccttcccgttcctgtagccgtggcgaccaca
acactgacggtcgcctgccagggtcgcacagaaaggtccgaggtcgaagatcgcaagtgc
aacaaaccgccggtggcgagacgtccatcttggcttgcagacaaccatccaccaacattc
agtcacagagctgctagtgtgtcagacggctcagagagtgtgagtatgattgacatgcgc
tgcgaggaggacgccattctgccagcgcacagccaggctcgccacgagctcatgcacaac
cagtacaacatgctgaaggaggaagaggaccactggcaggatgatctggcccgctggaag
agtcgcaggagaagcgtctcccaggacctcatcaagaaggaagaggagaggaagatgatg
gagaagctgatgactggcgatggtggggccacttctcagaggaggaagagcatcaagacc
tacagggagattgtggaggagaaggagcggcgtgagaatgagctccgcgaggcctaccgg
tcagcccgcaccccggaggaggcggctgcggtgctccatcgctacgcccaacgcttcacc
atcagcgaggcagtgctggaacgtctgcagcttcccaaactgctggaccggagcgtgtcc
gatgacccttctgccgccatgcgtcttcccctaactccgacctcctgccctctgacgccc
gcatccccagaagacgatccgaatggccccatgaagtacctgaggcagcagtcgctcccc
gcgcccaagttcaccgccactgttgaggccagggtgctggggttcccccagggtcagtcg
catcggccccagatacggtcacgcacgcccgaaccgaaccccacagcccggggggtttcg
accaagtcggtgcctttgctgacgcccaagccttacatccaacccaagggaatgcagacc
caggccccagcccggcctggcaaggtcgacggcttgctacgagtgaatggcgaaacaggg
aatgacgaggtcaccactccagagagcgaggggaggacctccccgctacgattctaccct
tgccccgacacaccgacagcctcctttgacccatttgacacgcccccgcgtgcggcaact
ccccaacccgcacagagcccatcccccagggcgagccaatcaccagccattccagtggac
gcggaggttggttcaagcacaagcaccatggtcccaccttcttctgtgtcaggggaaggt
gtcgcccaggagagtaaaacatgggagtctgccccgccgagccgacccacctcccttccc
gtggagctacagagtgcagggggcatggtggatgcgggagggatgtctgctgcagggaca
ctggaggaggaggagccgaacacagcagaggccgcagcaaagccttctccagctacagtg
tctcaacaagattccaagggacaaacagaggtgtgtatgaatgccaaagaagccagacct
gacaccccacctctcgtccaatcagaacccacaaagcagcaagcagcactgatgaatgca
caggtcagacagcccagcctggcgtcttctcagagaccagaggaagttgccgccttggct
gatccaggacctgtcggaaacacactccgatgtgaagcgcccacaacggagctgactgac
attgccagttatccgctagaacccggcaatcctaggttaggccgacgtcgagagttcttc
accccgtcagagggggcagagaaagagcttggtaaagtagcggtcactcaggtgtcatcc
ccgatagtgacccaggctaagcggggtgaccgctggtcttgggacccagatgaggaacga
aagcgtcagaaaaggtggcagcaagagcaggagcgcatgcttcaggagaagtaccggagg
gagcaggagaagctgaaacaggaatgggagaaggcacagagggaggtagaagaggaggag
cggaggtaccatgaggaggagcgtaggatattagaggagactgtgacgcccctgacccca
cactcatccgccctgccctcgcccatccggggagaagcccccttgtccatggacccccag
gataccatcgtccggtcgctggccgactgggaacgcaagcaggagctgctggagagacag
ggggggagctcagagagtgtggaatggaaacaacgagacaatgacaggagtagtgacatc
agcacggcgtccagagacgacagcatgaaaacagcagtcagctctatcagccaaaatagc
agtcggtcagacaagctgacgcccagtattcagaatggccaaagagtgtctcccaatacg
gttctgcccaacaagaaaccacaaccggagatgctgttggactgcaccagacccagtcag
cagacagcctctcgggacaggaggtgtggctccattgaaaccatggcagccagtccatca
aagtcacccaccacatccccatccgacatgcctccatctccaaacaggtcggtgagtggt
aagaagctgtgctccagttgtggtaaccctctgggaaaaggggcggccatgatcattgag
accctcagcctttacttccacatccagtgctttaagtgtggtgtctgtaaaggccagctg
ggcgatactagtacagggacagacgtaaggatccggaatggccttctcaactgccaccaa
tgctacattcgctctcgttctgctggccagccaaccacgttgtga
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