Esox lucius (northern pike): 105026126
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Entry
105026126 CDS
T04894
Symbol
usp39
Name
(RefSeq) U4/U6.U5 tri-snRNP-associated protein 2
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
els
Esox lucius (northern pike)
Pathway
els03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
els00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105026126 (usp39)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
els03041
]
105026126 (usp39)
Spliceosome [BR:
els03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
105026126 (usp39)
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Ortholog
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GFIT
Motif
Pfam:
UCH
zf-UBP
UCH_1
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
105026126
NCBI-ProteinID:
XP_010895679
UniProt:
A0A6Q2Y2N5
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Position
LG13:complement(20159168..20166782)
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AA seq
498 aa
AA seq
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MINAMVSIKRERELDLEDDDEVPVKIGRSSEDRRSRHCPYLDTINRSVLDFDFEKLCSIS
LSHINVYACLICGKYFQGRGLKSHAYTHSVQFTHHVFLNLHTLKFYCLPDNYEIIDSSLE
DITYVLKPTFTKQHIAGLDKQGKLYRAYDGTTYLPGIVGLNNIKANDYANVVLQALSNVP
PLRNYFLEEENYRGIRRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQAVVLCS
KKNFQITKQGDAVDFLSWFMNALHGALGGTKKKPSSLTKVFQGSMRIFSKKLPHPDLPPE
EKEALLLKEEYQEVMSESTFLFLTLDLPTAPLYKDEKEQLIIPQVPLFNILAKFNGNTEK
EYKTYKENFLKRFQLLKLPPYLIFCIKRFTKNNFFVEKNPTIVNFPITNVDLREYLTEEA
QVTEKNTTYDLVANVVHDGKPTEGAYRIHVLHHGTGKWYELQDLQVTDILPQMITLSEAY
IQIWKRRESEDDDNHTGA
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atgattaatgcaatggtttctataaaacgagagcgagaacttgacttggaggacgatgat
gaagtacctgtgaaaattggccgttcgtccgaggaccggagaagtcgccactgtccctac
cttgacacaattaataggagtgtgctggacttcgattttgagaagctgtgctccatttcg
ctttcccacattaacgtgtatgcctgtcttatctgtggaaaatacttccaaggtcgaggt
ttgaagtcccatgcctacactcacagtgttcagttcacgcaccatgtatttctcaatctg
cacacactcaagttctactgtctgccagataactatgagattattgactcatcgctggaa
gacatcacgtatgtcctgaagcccacattcaccaaacagcacatcgctggattggacaag
caaggaaagctgtatcgagcttatgatggcactacctatctgcctggcattgtggggctc
aacaacatcaaggctaacgactacgctaatgtggtgctacaggccctgtccaatgtgcca
ccgctacggaattacttcctggaagaggagaattaccgcggcatccgtaggccacctggt
gacatcatgttcctgctggtgcagcgtttcggtgagctgatgcgcaagctgtggaacccg
cggaacttcaaggcccatgtctcgccccatgagatgttgcaggcagttgtgctgtgtagc
aagaagaactttcagattaccaagcaaggggatgctgtggacttcctgtcctggttcatg
aatgctctgcatggggcattgggaggaaccaagaaaaaaccatcaagccttaccaaagtg
ttccagggttccatgcgtattttctccaagaagcttcctcatccagatttgccaccagaa
gagaaagaggctctgctcttgaaggaggagtaccaagaggtgatgtctgagtctaccttc
ctcttcttgacccttgaccttcccacagccccgctgtataaagatgagaaggagcagctt
atcattccacaggtccctctcttcaacatcttggccaagttcaacggcaacacagagaag
gagtataaaacctacaaagagaatttcctcaagaggttccagctgctcaagctgcccccc
tatctcatcttctgcatcaagaggttcacgaagaacaatttctttgtggagaagaaccct
accattgtcaacttcccaatcacgaatgtagaccttcgtgagtacctgaccgaagaggct
caggtcacagaaaagaacaccacctatgacctggtggccaatgtggtgcatgatggaaag
cccacggaaggggcatacagaatacatgtcctgcatcatggcactgggaagtggtatgag
ctccaggacctgcaggtcacggatatcctgccccagatgatcacactgtcagaggcctac
attcagatttggaaaagaagagagagtgaagatgatgacaaccacacaggagcttga
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