Esox lucius (northern pike): 105026180
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Entry
105026180 CDS
T04894
Name
(RefSeq) protocadherin beta-16
KO
K16499
protocadherin delta 2
Organism
els
Esox lucius (northern pike)
Brite
KEGG Orthology (KO) [BR:
els00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
els04515
]
105026180
Cell adhesion molecules [BR:
els04515
]
Cadherins
Protocadherins
105026180
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Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
105026180
NCBI-ProteinID:
XP_010895780
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Position
LG04:10845572..10854303
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AA seq
1021 aa
AA seq
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MEHMMLSTRWTPLTGMVVCLLVCACVVDLVLAQIRYSIPEELEHGAFVGNIAEDLGLDVA
KLSSRRFRIVSGAKKQYLEVNLENGILFVNEKIDREELCERSPTCFLHLQVVIENPLELY
RVEVEILDVNDNSPSFPWSEFNLEITESAAPGSRFPLESAQDQDVGTNSLRSYQLSTNKH
FVLNIQTRNDGSKFAELILETPLDREQQKTHEMVLTAVDGGSPERSGTALITITVLDAND
NVPVFDRSVYRASLVENAPRGTLVLKLNATDLDEGANGEVSYAFSGHAPLKVRELFSVDQ
YTGEIRVKGIVDYEKASVYELYVQAKDRGASAVAVHSKVLVDILDVNDNAPEVILTSVST
PVQEDAPPGTVIAVISVMDRDSGENGNVDCQIPSNVPFQLHSSFKNYYTLVTSEFLDREA
VSEYNITLTARDLGSPSLSTRKTILVQVSDINDNPPRFTQPSYTVYVTENNAPGASICSV
TAFDPDSNQNAYLSYSILEGQIQGMPVSTYVSINSDNGNIYALRSFDYEQLRNFQIRVQA
QDAGFPPLSSNVTVNVFVLDQNDNAPVIVSPLPKNGTVATEVVPRSVDAGYLVAKITALD
ADAGQNSRLSYQVLQATDPGLFSVALYTGEIRTIRRLVDKDATRQRLVILVKDNGQPPLS
ATVSILLSVVDNVPESLSDFGDLTLSPPPPSNLALYLIVSLSTISLIFLVAIIVLATIKC
YKDRETLSGYNLPPLACCCCGGFQPEPPSEVFKKSNLNLQISTGAKVPTNCMEVNGNNGT
LSQAYCYKVCLTPESSKSDFMFLKPCSPSNTPRNNEAKGADNLAWSAHNRCASVNNHSGA
TTPNELKQPNTDWTLTKNQNTSLKSYNSINMDGTLMRKAMHADPENYMAPAAGQYWTWGT
HMRDYKMSPPATGPPPPRSWTPRCTPPPPPPPQPQPQQLPPHPHPHPHPHPHPPPDYQHN
VYIPGTPSALCTLRPAAAHHRSELDVHNSFSTFGKKRRLIHNYEPQADTAAAVINNDLYN
D
NT seq
3066 nt
NT seq
+upstream
nt +downstream
nt
atggagcacatgatgttgagcacccggtggacaccgttaactgggatggtggtatgcctc
ctggtgtgcgcgtgtgtggtggatctggttttggcacaaattcgatactccattcccgag
gagttagagcacggggcttttgtcggtaacattgcggaggacctgggcttggatgtggcc
aaactctcctcccgtcgatttaggatagtctccggtgccaagaaacagtatttagaggtg
aatctggaaaacggtattttattcgttaacgagaagatcgaccgcgaggagctgtgtgaa
cggagtccgacttgtttcttacacttgcaagtggtgatcgagaatccgttagaactatat
agagtggaggtagagattttggatgtaaacgacaactctcccagcttcccatggagcgag
ttcaatttggagattactgagtctgcagcgcccggttcccggttcccgttggaaagtgcg
caggatcaggacgtcggcaccaactcgctccgctcataccagctgagcaccaataaacac
tttgtgctgaacatacagacgcgtaatgacgggagcaagtttgctgagctcatactggag
accccgctggaccgggagcagcagaagacgcatgagatggtgctcactgcggttgacggt
gggtcgcccgagcgctctggaacggctctcatcacaatcacggtgctggatgctaacgac
aacgtgcccgtttttgaccggtctgtttaccgcgcgagtctggtagaaaacgcacccagg
gggactttagtgttgaaattaaatgctaccgatttggacgagggtgccaacggggaggtc
tcatacgcgttcagtggccacgcaccgctcaaagtgcgtgagctattcagcgtggaccag
tacactggtgagatccgagttaaagggattgtggactacgaaaaagcgagtgtttatgag
ctttacgttcaggctaaagacaggggtgcttcggccgtggctgtacacagtaaagtactg
gtggatatcttagatgtgaatgacaacgcgccagaagtcatcctgacctctgtatccaca
cctgtccaggaggacgcgccaccgggtacagtgatagcagttataagcgtcatggacaga
gactcaggtgagaacgggaatgtggactgccaaatcccgagcaacgtgcccttccagctc
cactcatcttttaagaactactacactctggttactagtgagtttctagacagagaagcc
gtctctgagtacaacatcaccctcacggcccgggacctgggctccccgtcgctatccact
aggaaaacaattcttgtccaagtatctgatattaacgacaaccccccgcgcttcacccag
ccatcatacacagtttatgtgaccgagaataatgccccaggtgcatccatttgctcagtc
actgctttcgatcccgattctaatcagaacgcttatctatcctactcgattctggagggt
cagatccagggaatgcccgtgtccacttacgtctccatcaactcggacaatggaaacatt
tacgcgctgcgatccttcgactacgagcagttaaggaactttcaaatacgggttcaggcg
caggacgccggatttccccctcttagcagcaatgtcacggtgaatgtgttcgttttggac
cagaacgataacgctccagtcatagtgtcccccttgcccaagaacgggaccgtggcgacc
gaagtagtcccgaggtcagtggatgcggggtacctagtggccaagatcactgcgctagac
gcagacgcagggcagaactcccgactctcttatcaggtcctccaggctacggacccgggg
ctgttcagtgtcgccctctacacgggagaaatcaggacgattcgccggttggttgataag
gacgctaccaggcaaagacttgtcatcctggtcaaggacaatggccagccacctctctcc
gccaccgtctccatcctcctctcggtggtcgacaacgtgccggagtctctgtcagatttc
ggcgacctcactctgagcccgccgcccccctccaaccttgctctctacttgatcgtgtca
ctgagcaccatctcgctaatcttcctggtggctattatcgtgctagctacaatcaagtgt
tacaaggacagagagactctcagtgggtataacctccccccccttgcctgctgctgctgc
gggggatttcagccagagccaccctcagaggtttttaagaaatctaacctgaacctgcag
atctccaccggggcgaaggttcccaccaactgcatggaggtgaacggaaataacggcact
ctgtcccaagcctactgctataaagtgtgtttgacccctgagtcatctaaaagtgacttt
atgttcctgaaaccgtgcagccccagcaacaccccgaggaacaacgaggcaaaaggggct
gacaacttggcttggagcgctcacaacagatgcgcgtcggtgaataatcactccggagcc
accacgccgaatgagctcaagcaaccaaacactgactggactctcacaaaaaaccagaac
acctctctgaaaagctataactccatcaacatggacggcaccctgatgaggaaagccatg
catgcagacccagagaactacatggcccccgcggctggccagtactggacctggggcacc
cacatgcgggactataagatgtctcctccggccacaggccctcctcctcctcgctcctgg
accccccggtgcacccccccccccccgccgccgccccaaccacagccgcagcaacttccg
ccacacccccaccctcacccccaccctcacccccacccgcctccagactatcagcacaat
gtgtacatcccaggaacgccgtccgccttgtgcaccctgaggccggcagccgcccaccac
cgcagcgagttggacgtccacaactccttctccaccttcggcaagaagagacgactcatc
cacaactacgagccccaggcggacacggcggcggccgtcataaacaatgacctgtacaat
gattaa
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