Esox lucius (northern pike): 105026207
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Entry
105026207 CDS
T04894
Symbol
lsm4
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm4
KO
K12623
U6 snRNA-associated Sm-like protein LSm4
Organism
els
Esox lucius (northern pike)
Pathway
els03018
RNA degradation
els03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
els00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105026207 (lsm4)
09123 Folding, sorting and degradation
03018 RNA degradation
105026207 (lsm4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
els03019
]
105026207 (lsm4)
03041 Spliceosome [BR:
els03041
]
105026207 (lsm4)
Messenger RNA biogenesis [BR:
els03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
105026207 (lsm4)
mRNA degradation factors
5'-3' decay
Lsm complex
105026207 (lsm4)
Spliceosome [BR:
els03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
105026207 (lsm4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
105026207
NCBI-ProteinID:
XP_010895817
LinkDB
All DBs
Position
LG08:3150112..3153654
Genome browser
AA seq
145 aa
AA seq
DB search
MLPLSLLKTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRMPECY
IRGSTIKYLRIPDEIIDMVKEEVVSKGRGRGGMQQNKQQGKGRGGGAGRGVFGGRGRGMP
GVGRGQQQQEKKPGGAKPQGVKNQH
NT seq
438 nt
NT seq
+upstream
nt +downstream
nt
atgctacctctatctttgttgaagactgcacagaaccacccgatgctggtagaattgaag
aatggagagacgtacaatggacacttggtcagttgtgacaactggatgaatatcaactta
agagaagtcatctgcacctcaagggacggcgataagttttggaggatgcccgagtgttac
atccgagggagcaccattaaatacctgcgcatccccgacgagatcatcgacatggtgaag
gaggaggtggtgtccaagggacgcgggcgcggtggcatgcagcagaacaaacagcagggc
aagggccgaggaggaggcgcaggcagaggtgtgttcgggggtcgtggtcgcggcatgcca
ggagtgggccgaggccagcagcagcaggagaagaagccaggtggtgccaaacctcaggga
gtcaagaatcagcactga
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integrated database retrieval system
