Esox lucius (northern pike): 105026339
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Entry
105026339 CDS
T04894
Name
(RefSeq) serine/arginine-rich splicing factor 6
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
els
Esox lucius (northern pike)
Pathway
els03040
Spliceosome
els05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
els00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105026339
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
105026339
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
els03041
]
105026339
Spliceosome [BR:
els03041
]
Common components
Common spliceosomal components
SR proteins
105026339
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_5
DbpA
RRM_occluded
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
105026339
NCBI-ProteinID:
XP_010896036
LinkDB
All DBs
Position
LG12:32003404..32007520
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AA seq
333 aa
AA seq
DB search
MPRVYVGKLSYHAREKDIQRFFSGYGKLMEIDLKNGYGFVEFEDNRDADDAVYELNGKEL
CGERVTVEHARGPRRDRDGYGGGRSSSGYSSSRSRTGRDKYGPPVRTEYRLIVENLSSRC
SWQDLKDFMRQAGEVTYADAHKERANEGVIEFGSRSDMRRALDKLDGTDINGRKIRLVEE
KSRRRRSGSRSRSGSRSRRRSRSRRSSRSRSNSRSRSRSHSRSKRRRSRSGRKSRSRTRK
SRSRSRSRKSRSRSDKSKSRSKSRSKVKSERDSRSRSKEKSASKKSRSRSASPMGNGKED
RASRSPSPAADRRSKSPDKRSVSRSRSRSASRD
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgcgtctatgttggaaaattgagttatcatgctcgagaaaaagatattcagagg
tttttcagtggctacggaaagcttatggaaattgatctgaaaaatggttatggctttgta
gaatttgaagacaaccgcgatgcggacgacgcagtgtatgaactgaatggcaaggagtta
tgcggtgagcgcgtgacggtggaacatgcccgaggaccgcggcgcgaccgcgatggatat
ggtggtggtcgcagtagtagtggttacagcagcagccgaagccgcactggaagggataag
tacgggcctcccgtccgtacggagtaccgtttgattgttgagaatctgtccagccgatgc
agttggcaggatctgaaggatttcatgcgccaggctggagaggtcacgtacgctgatgcc
cacaaggagcgagccaacgaaggagtcattgagtttggctcacgctcagacatgagaagg
gccctggataagctggatgggacagacatcaatgggagaaagatccgcttggtggaggag
aagtctcgccgccgtcgctctggctctcgcagtcgctccggttctcgcagcagacgacgc
tctcgtagccgtaggagcagccgctccaggagtaactctcggtcccgatcccgatcccat
tctcgcagcaagaggcgccgctccaggtctggacggaaatctcgctctcgcacccgcaag
tctcgttcccgctctcgctcccgcaaatccagatctcgttctgacaaaagcaagtcccgt
tctaagagccgttccaaagtgaaatccgagcgggactcccgcagccgttctaaggagaag
tctgccagcaagaagtcccgtagccgctccgcatccccaatggggaatggaaaggaggac
cgtgcctctcgctccccatccccagcagctgaccgccgctccaaatctccagacaagcgc
tcagtctcccgctccaggtctagatctgcctcccgagattaa
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