Esox lucius (northern pike): 105026478
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Entry
105026478 CDS
T04894
Name
(RefSeq) sodium- and chloride-dependent GABA transporter 2 isoform X1
KO
K05046
solute carrier family 6 (neurotransmitter transporter, GABA) member 13
Organism
els
Esox lucius (northern pike)
Pathway
els04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
els00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
105026478
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
els02000
]
105026478
Transporters [BR:
els02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
105026478
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Motif
Pfam:
SNF
ABHD16_N
Motif
Other DBs
NCBI-GeneID:
105026478
NCBI-ProteinID:
XP_010896261
UniProt:
A0A3P8X8R8
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Position
LG17:14746600..14770989
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AA seq
616 aa
AA seq
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MEKHNDANKRFSKLAQQEMGLVQRVLVPSTNVRGQWSSKLEFLLAVAGQIIGLGNIWRFP
YLCYKNGGGVFFIPYVLFLFTCGIPIFLLETSMGQYTTQGSITCWRNICPLFEGLGYGSQ
VVVLYSSIYYIIILAWAFFYLFSSFSSELPWASCRNSWNTATCLEFDRTVGGNLNRTVVG
NITSPEKEFWERRVLNLTDSVSNLGNVRWELALCLLLSWIICYFCVWKGVKSTGKVVYFT
ATFPYVMLGVLLVRGLTLPGAIDGIKFYLYPDPARLADPQVWMDAGTQIFYSYAICIGCL
IALGSYNKYDNNCYKDCMYLCLLNSGTSFIAGFAIFSVLGFMAYEQGTDISTVADSGPGL
AFIAYPRAVAMMPVPQFWAICFFIMIILLGLDSEFVGLEALMTSISDMYPSFFLVGHRRK
LLLLLISVGCFFIGLVMVTEGGLYIFQLFDYYTCSGMTLLLFATLQSVCISWVYGADRMY
ENIEDMIGYQPLPLIKYCLKYVTPVICTATFIFSLVKFTPLKFNNKVEYPWWCYVIGWWF
TLSSTLMVPLWMIYIVSVTPGTLRQRLSILTTPSDKLPMSKAQKKELQARQSDQDKSMEE
MEMPTSDNKHRDTGPL
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atggagaaacataatgatgcaaataagagattctccaagctggcccagcaggagatgggt
ttagtccaacgtgtccttgtgcccagcaccaacgttaggggacagtggtctagcaaactg
gagttcctcctggctgtggctggacagatcattggcctagggaatatatggaggttccca
tatctgtgctacaaaaatgggggaggggtgttcttcatcccttatgtgctcttcctgttc
acctgtggcattcccatctttctcctggagacttccatgggccagtacaccacgcaaggc
agcatcacctgttggaggaacatatgccctctgtttgaaggtctgggttatgggagtcag
gtggtggtcctatattccagcatctattacatcatcatccttgcctgggctttcttctac
ctcttctcttcatttagctcggagctcccctgggccagttgtagaaacagctggaacaca
gctacctgcctggagtttgacaggacagtaggaggaaatctgaacaggactgtagtagga
aatataacatcgccagagaaagagttctgggagagaagagttttgaatctcacagacagt
gtctccaaccttggtaatgttcgctgggagctagcgctatgtcttcttctgtcctggatt
atctgttacttctgtgtctggaaaggagtcaagtctactgggaaggtggtttacttcact
gccaccttcccttatgtgatgctgggggtgttgcttgttcgtggactcacactgccgggg
gccatagatggcattaaattctacctctatccagatccagcccgcctcgcggacccacag
gtgtggatggacgccgggacacaaatattctactcctatgctatttgcattggctgtcta
atcgctcttggcagctacaacaagtatgacaacaactgttacaaggactgtatgtacctc
tgcttactgaacagtggaaccagcttcattgctggtttcgctatcttctctgtacttggg
ttcatggcctatgaacaagggacagatatctcaacagttgccgattcgggtccgggcctg
gcattcatcgcctaccctcgtgctgtggccatgatgccagtaccccagttctgggccatc
tgcttcttcattatgatcatcctactgggactagacagtgagtttgtaggtctggaggct
ctgatgacatccatctcagacatgtatccctccttcttcctggtaggccatagacgtaaa
ctcctcctcctcctcatcagtgtgggttgcttcttcattggccttgtcatggtcacagag
ggaggcctgtatatattccagttatttgactactatacctgcagtggaatgactctcctt
ctctttgctacactacagtcagtgtgtatcagttgggtttatggtgctgaccgtatgtat
gaaaatatagaagacatgatcggctatcaaccattacccctaattaagtactgtttgaag
tatgtcactccagtcatctgcacggctacatttatcttctcgttggttaagttcacccct
ctgaagttcaacaacaaagttgagtatccatggtggtgttatgtcatcggctggtggttt
actctctcctccacactcatggtgcctctgtggatgatctacattgtgagcgtcacccct
ggcacgctacgacagagactgtccatcctcaccaccccatcagataaacttcccatgagc
aaggcccagaagaaggaactccaggccaggcagtcagatcaagacaagtccatggaggaa
atggagatgccaacctcggacaacaaacacagagatactggccctctgtaa
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