Esox lucius (northern pike): 105026488
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Entry
105026488 CDS
T04894
Name
(RefSeq) lymphocyte-specific protein 1 isoform X1
KO
K12327
caldesmon
Organism
els
Esox lucius (northern pike)
Pathway
els04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
els00001
]
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
105026488
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
els04812
]
105026488
Cytoskeleton proteins [BR:
els04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
105026488
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Caldesmon
SBDS_domain_II
Motif
Other DBs
NCBI-GeneID:
105026488
NCBI-ProteinID:
XP_010896272
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Position
LG02:5204065..5238503
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AA seq
546 aa
AA seq
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MSGHLLRRNTSKAGLQNLLRMTTQRSMEDAEEIERERRRRARERSQGSHNDQTGPASPTR
LTQDNGPQETDALCESELKANGCQLALEEDEGFSDWTQRLEKRRQRHLEEQEGRGDRPPP
ALDQQPGLNGVAPTKPCLKTRSVPGPEETEEWEWSGSETQEAPQTVDGDKVRLRCRPNWI
QSENRSSFKVAEKKRSELKISYTSNMKKHVRRNGETPGVEVTSYLVAGKMTPSLSPCLGQ
QVEEVDGGAHEGLMETQQKLGQGHGTLEQLRQRQQEDQEEMEEVNRRREERNRAREEEEQ
RRGEEESHKQKQVEEETRTVNEGIDRRRASAERRLKNLSISSNEGDESLGHFSPMSPTFK
NEVEERMTTESACTLNERTESLNRSLQKSNSIKKTEPPLPISKIDNRLEQYTHAIEEAKV
AKQQALTDLPSPSEPVASKKSLFEAGEAWSQTPKGTPSKDTEGLKVGVADLIHQWVKGNP
DGSCKSPSSIPAEVKAGDVLSKKNLWENVGDSPSPGRVGKGAAGKKYKFVMMAHGKYEKV
AVGDDA
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atgtctggtcatttactaaggagaaacaccagcaaggcaggtctccagaacctgctgagg
atgacgacccagaggagcatggaggatgccgaggagatcgagcgggaacggcggcgtagg
gcccgggagagaagccaggggtcccacaacgaccagaccgggccagcaagccccactcgc
cttacacaggacaacgggcctcaggaaacagatgcactgtgtgagagcgagctgaaggcg
aacggttgccagctggccttggaagaagacgagggcttcagcgactggacccaaaggttg
gagaaacgcagacagcgtcacttggaggagcaggagggccgaggggaccggcctcctcca
gccctggaccagcagcccggcttgaatggggtggcccccaccaaaccatgccttaagact
cggtccgtgcctggaccggaggagacggaggaatgggaatggagtgggagcgagacacaa
gaggctccccagacggtagacggtgacaaggtgcggttacggtgccgaccaaactggatt
cagtcggagaaccggtccagtttcaaagtggcagaaaagaagaggtccgaattgaagata
tcctacacatctaacatgaagaagcacgtcaggaggaacggggaaacacctggggtggaa
gttacttcatatctagttgcagggaaaatgaccccaagtctcagtccatgcttgggacag
caggtggaggaggtagatggaggtgctcatgagggcctgatggagacacagcagaagctg
ggccagggacatggaaccctggagcagctgagacagaggcagcaggaggaccaggaggag
atggaggaggtgaaccgcaggagagaggaaagaaatagagccagggaggaagaggagcag
cggagaggggaggaagagtcacacaaacagaagcaagttgaggaggagaccaggaccgtg
aatgaggggatagacaggaggagggcatcggcggagagaaggttgaagaacctcagtatc
tccagcaatgaaggagatgagtcactcggccattttagtcccatgagccccacattcaag
aatgaggtggaggagagaatgacaacagagagcgcgtgtacgctcaacgagaggaccgag
tctctgaatcgctctctacagaaaagtaacagcataaagaagactgagcctcccctaccc
atctccaagattgacaacagactggaacagtacactcatgcaattgaggaagcaaaggtc
gccaagcaacaggccctgacggacctgcccagcccctctgagcctgtagcctccaagaag
agcctgtttgaggcaggggaagcctggagtcagacccccaaggggacaccctccaaggat
acggaaggtctgaaagtaggcgtggccgacctcatccaccaatgggtgaagggaaaccca
gacggcagctgcaaaagcccctcctccataccagccgaggtgaaggctggtgatgtgctg
agcaagaagaacctctgggagaacgtaggagactctccgtcacctgggagagtaggaaag
ggagccgctggtaaaaagtacaagtttgtgatgatggcccacggcaagtatgaaaaggtg
gcggttggtgatgatgcttga
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