Esox lucius (northern pike): 105026524
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Entry
105026524 CDS
T04894
Symbol
lrp6
Name
(RefSeq) low-density lipoprotein receptor-related protein 6 isoform X1
KO
K03068
low density lipoprotein receptor-related protein 5/6
Organism
els
Esox lucius (northern pike)
Pathway
els04150
mTOR signaling pathway
els04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
els00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
105026524 (lrp6)
04150 mTOR signaling pathway
105026524 (lrp6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
els04131
]
105026524 (lrp6)
Membrane trafficking [BR:
els04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
105026524 (lrp6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_b
FXa_inhibition
Ldl_recept_a
Vgb_lyase
EGF_LRP2
SGL
DUF5050
cEGF
EGF
Motif
Other DBs
NCBI-GeneID:
105026524
NCBI-ProteinID:
XP_028980860
LinkDB
All DBs
Position
LG14:complement(762606..815097)
Genome browser
AA seq
1620 aa
AA seq
DB search
MGAVLRTLLLCSFCLLIRGGPLLLYANRRDLRLVDASRGRANATVVVGGLEDAAAVDYVY
AQGLVYWSDVSEEAIKRTVFNQSGPGGTATQTVVLSGLASPDGLACDWLGRKLYWTDSET
NRIEVAELDGSLRRVIFWEDLDQPRAIALDPVRGYMYWTDWGEVPKIERAGMDGTNRAMI
IDKEIYWPNGLTLDYNQEKLYWADAKFNFIHRSNLDGTGREVVVKGDLPHPFALTLYEDT
LFWTDWKTRSIHSCQKDTGEDQRNVHSDIFSPMDIHVYSQKRQPQLSTPCSVRNGDCSHL
CLLSPNKPSYQCACPTGVQLLEDGRTCRNGATQLLLLARRTDLRRISLDTPDFTDIILPT
DDIRHAIAIDYDPVDGHIYWTDDEVRAIRRSSLDGSDAQFIVTSQVNHPDGIAVDWIARN
LYWTDTGTDRIEVTRLNGTMRKILISEDLDEPRAIVLDPVAGYMYWSDWGGVPKIERADL
DGLERVVMVNTSLGWPNGLALDYVDRMIYWGDARTDKIEMIGMDGSGRRVLLDDKLPHIF
GFSLLGDFIYWTDWQRRSIERVHKHTAEREVIIDQLPDLMGLKATYVHKTFGTNPCAEAN
GGCSHLCLYKPTGVQCACPIGLELISDLSTCIVPEAFLLFSRHTDIRRISLETNHNNVAI
PLSGVKEASALDFDVTDNRIYWTDITLKTISRAFMNGSALEHVVEFGLDYPEGMAVDWLG
KNLYWADTGTNRIEVAKLDGQHRQVLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRA
AMDGTGRVTLVPNVGRANGLTIDYAERRLYWTDLDTTLIESSNMLGLEREVIADDLPHPF
GLTQYQDYIYWTDWSQRSIERANKTSGQNRTVIQGHLDYVMDILVFHSSRQGGWNACAST
NGHCSHLCLAVPISSFVCGCPAHFSLNYDNKTCSAPTSFLLFSQKSAINRMVMDEQQSPD
IILPIHSLRNVRAIDYDPLDKQLYWIDSKLNVIRRAQEDGNMSMTVVSSNVGSPNLGLQP
FDLSIDIYSRFIYWTSEVTNVINVTRTDGSRVGVVLRGEHDKPRAIVVNPERGYMYFTNL
QERSPKIERAALDGTEREVLFFSGLGKPVALAIDNEVGKLFWVDSDLRRIESSDLTGANR
IVIEDSNILQPVGLTVFGNHLYWIDRQQQMIERIDKTTREGRTKIQARIATLSDIHAVHD
LDMREYSKHPCTWDNGGCSHICIVKGDGTTRCSCPVHLVLLQDELSCGEPPTCSPEQFSC
ASGEVDCIPKAWRCDGFPECDDHSDERDCPLCSPSEFQCDSTQCVDLSLRCNGEDNCQDR
SDENKCEVHCSPDQFSCSNGQCVGKHQKCDHFPDCSDNSDEIGCYSTEEPSTPPTNTIGS
IVGVVMALFVVGAVYLVCQRVLCPQMKDDGETVTNDFVVHGPSSVPLGYVPHPSSLSGSL
PGMSRGKSVIGSLSIMGGSSGPPYDRAHVTGASSSSSSSTKGTYFPPILNPPPSPATVRS
QYTLEFGYSSNSPSTHRSYSYRPYTYRHFAPPTTPCSTDVCDSDYTPGRHAPPTSNSAVA
KGYTSDLNYDSEPLPPPPTPRSQYLSAEENCESCPPSPYTERSYAHHLYPPPPSPCTDSS
NT seq
4863 nt
NT seq
+upstream
nt +downstream
nt
atgggcgccgtgctacggactctgttgttgtgtagtttttgtttgctaatacgaggtggg
cctctcctgctgtacgccaaccggcgggacctgcggctggtggatgcgtcgcgcggccgg
gccaacgccaccgtggtggttggaggtctggaggacgcggcggctgtggactacgtctat
gctcagggcctggtctactggagcgacgtcagcgaggaggcaatcaaacgcaccgtcttc
aaccaatcaggacccggaggcacggcaacacagacggtggtcctatcaggattggcctct
ccagatgggctggcctgtgattggctgggcagaaagctgtactggacggactcggagaca
aatcgtatagaggtggcggagctggatgggtctttacggagagttattttctgggaagac
ctagaccagccgcgagccatcgctctggacccagtgagagggtacatgtattggacagac
tggggagaagttcctaagatcgagcgagcagggatggacggcactaacagagcaatgatc
atcgataaggagatttactggcctaatggcctgacgctagactacaaccaggagaaactg
tactgggccgacgccaagttcaacttcatacaccgctccaacctggatggaactggcagg
gaggtggttgttaagggagatcttcctcacccctttgcactgacactgtatgaagacact
ctgttctggaccgactggaaaacccgttccatccactcctgtcagaaagacaccggggag
gaccagcggaacgtccactctgacatcttctctcccatggatatacacgtctacagccag
aagagacagccacaactgtctacgccatgctccgtgaggaacggggactgttcccatctc
tgcctcctgtctcctaacaagccttcctaccagtgtgcctgtcccaccggggtccagctg
ttggaggatggccggacctgcagaaatggtgccacccagctcctcctcctggcccggcgg
acggacctgcggaggatttctcttgacacacctgacttcacggacatcattctgccgacg
gatgacatacgccacgccatcgctatcgattacgaccccgtggacggacacatctattgg
acggacgatgaggtcagggctatccggaggtcctcccttgacggctctgacgctcagttc
atcgtcacctcacaggtgaaccacccggacggcattgctgtggactggatcgctaggaac
ctgtactggacggacacgggcacggatcgcatcgaggtcacacgtctcaatggaaccatg
aggaagatcctgatatctgaggacctggatgaacctcgagccatcgtgctggaccctgtt
gccgggtacatgtactggtccgactggggtggtgttcctaaaattgaacgtgctgacctg
gacgggctggagagggtagtgatggtcaacacgtccctgggctggcctaatgggctggcg
ctggactatgttgacaggatgatctactggggtgatgccaggactgacaagatagagatg
attggcatggatggttccggcaggagggtgctgctggatgacaaactgcctcacatcttt
ggcttcagcctcctgggggacttcatctactggacggactggcagagacgtagcattgag
agggtccataaacacacggccgagagggaggtcatcatagaccagctgcctgacctcatg
gggctaaaggctacctacgtacacaagacgttcggtacaaacccatgtgccgaggccaat
ggtggctgtagccacctgtgcctgtacaagccgacgggcgtccagtgtgcctgtccgatc
ggtctggagctgatctctgacctgtccacctgcatcgtcccggaggccttcctcctcttc
tcccgccacactgacatcagacgcatctccttggaaaccaaccacaacaacgtggccatt
ccgttgtcaggcgtcaaggaggcatcagctctcgacttcgacgtcactgacaaccgcatc
tactggactgacatcaccctgaagacaataagccgtgcattcatgaatggtagcgctctg
gagcatgtggtggagttcggcctggactacccagaaggcatggcagtggactggctgggg
aagaatttgtattgggctgacacagggaccaatcgtattgaggtggccaagctggacgga
cagcacagacaggttctggtgtggaaggatctggacagcccacgggccttggctctggat
cctgctgagggttttatgtattggaccgagtggggggggaaaccgaagattgaccgggct
gcgatggacgggacaggacgggtcactctggtgcccaatgtgggccgagctaacgggctg
acaatcgactacgcagagagacgcctctactggactgacctggacaccacccttatagag
tcctcaaacatgctgggtttggagcgtgaggtgatcgctgatgacctgccacacccattt
ggccttactcagtaccaagactatatctattggacggactggtctcagcgtagcattgag
cgggcaaataagacgtcaggacagaaccgcactgtcatacaaggtcatctggactatgtg
atggacatcctggtctttcattcgtctcgtcaggggggctggaatgcttgcgcctccacc
aatgggcactgctcacacctctgtctggctgtgccaatcagcagctttgtgtgcggatgc
cccgcccacttctccctaaactacgacaacaagacgtgcagcgcgccgacgtccttcctc
ctgttcagtcagaagtcagccattaaccggatggtgatggatgagcagcagtctccggac
atcatcctgcccatccacagcctgaggaacgtcagggccatcgactatgaccctctggat
aaacagctgtactggattgactccaaactgaacgtcatccgcagagctcaggaggacggg
aacatgagtatgactgtggtgtccagcaatgtggggagtcctaacctgggcctccagcca
tttgacctgagcatcgacatttacagccgcttcatctactggaccagcgaggtcactaac
gtcatcaacgtgacacggacagatggcagccgtgtgggagtggttctgagaggggaacat
gacaaacctagagccattgtggtcaaccccgagagaggctatatgtactttaccaacctg
caggagcgtagccctaagatagagcgagcagcgctggatgggacagagagagaggtgctg
ttcttcagtggcctggggaagcctgttgccctggccatagacaacgaagtgggcaagctg
ttctgggtcgactcggatctccgtcgcatcgagagcagcgacctcacgggagccaatcgg
attgtgatcgaggactccaacattctccagccggttggtttgactgtgtttggtaaccac
ctgtactggatcgaccgccagcaacagatgatcgaacgcatcgacaagaccacaagagag
ggcaggaccaagatccaagctcgtattgccacactcagtgacatccatgcagtccacgac
ctggacatgagagagtacagtaaacacccatgtacctgggacaatggcggctgttctcac
atctgtatcgtcaagggagacggaaccactcgttgctcctgtccagttcacctggttctg
cttcaggatgaactctcctgtggagagccccccacctgttctccggaacagttctcctgt
gcgtctggggaggtggactgcatccccaaggcgtggcgctgcgatggcttcccagagtgt
gacgaccatagtgacgaacgggactgtcccctgtgttccccgtccgagttccagtgtgac
tccactcagtgtgtggacctcagcctgcgatgcaacggggaggacaactgtcaggaccga
tcggacgagaacaagtgtgaagtccactgctccccagaccagtttagctgctccaacggt
cagtgtgtagggaaacaccagaaatgtgatcacttccccgactgctctgacaactcagat
gagatcggctgctactcgacagaggagccatccaccccgcccaccaataccattggttcc
atcgtgggtgttgtcatggcgctattcgtggtgggtgcggtctacttggtgtgccagcgg
gtcctctgtcctcagatgaaggacgacggggagactgtgaccaacgactttgtggtccat
ggaccctcctccgtccctctgggttatgtcccacacccctcctctctgtctggttctctg
ccaggcatgtccaggggtaagtctgtgattggttcgttaagcatcatgggcgggtccagt
ggaccaccatacgaccgtgcccatgtgaccggagcatcctcctcaagctcctcctctact
aagggcacttacttccccccgatcctcaaccctcctccttcccctgctactgtccgctct
caatacaccttggagtttggctactcctccaacagcccatccacacacagatcctacagc
taccggccgtatacataccgtcactttgcccctcccacaaccccctgctccacagacgtc
tgtgacagcgactatacccccggacgccatgccccacccacctccaactctgctgttgcc
aagggttacaccagcgacctgaactacgactcggagcccctccccccaccccctaccccc
cggagccagtacctgtcagcagaagagaactgtgagagctgccccccctccccctatacg
gagcgctcctatgctcaccatctgtaccccccacctccttcaccctgcacagactcctcc
tga
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