Esox lucius (northern pike): 105026717
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Entry
105026717 CDS
T04894
Name
(RefSeq) pre-mRNA-processing factor 39 isoform X1
KO
K13217
pre-mRNA-processing factor 39
Organism
els
Esox lucius (northern pike)
Brite
KEGG Orthology (KO) [BR:
els00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
els03041
]
105026717
Spliceosome [BR:
els03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
105026717
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_PRP39_N
HAT_PRP39_C
Suf
TPR_14
HAT_Syf1_CNRKL1_N
HAT_Syf1_CNRKL1_C
TPR_19
TPR_12
TPR_16
HrpB1_HrpK
TPR_11
UTP6_C
TPR_MalT
Motif
Other DBs
NCBI-GeneID:
105026717
NCBI-ProteinID:
XP_010896660
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All DBs
Position
LG04:complement(17686712..17694643)
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AA seq
724 aa
AA seq
DB search
MAAEGSDSEDLSSNGLIEAPSAPEAMEAVQPPPETVEATEENGGELASEASEAATAYNMP
LAENEEEDGELPADFDRLWKLAHDNPQDFSSWTDLLQYCEQESHMTASRRSLVAFLARYP
LCYGYWKKFADLERRAGYTNKAQEVCVQGLKAIPLSVDLWIHYINLLLGTLNMNLAESSQ
RIRSAFEEAVAAAGLDFHSDRLWELYIEWEKEQGDMRAASGVYDRVLRVPTQLYSSHYDK
FKTHLNTHAPKDVLSAEEYGRLLEECKQSHKIEKAEQAEGEEEIPPGEEKEPTEEELIPK
MRELLLARREKVFQDLEGEVRKRWNFEDAIKRPYFHVKPLDRTQLRAWHSYLDWELTQLD
AGDEQEVRTEVEPEGMEGWEEIKKEDNNGSNSSGIVAGGDQRVRILFERCLIACALYEEF
WTKYIQYLEPQSLDEARAVFRRACEIHLAHKHTMHLQWATFEERHGDLNEARRVLEALET
SVPGLAMVRLRRAGLERRAGRLDESEALLRDAVAQAKETPHLHAFYSIKLARLLLKLCKN
PSKARGVLQEALEISPDNSKLHLNLLELEVSGDPRGSAEGVQLCVSRALAAPLSPRTKIL
FSQRGLQYAEDYGTSVHSVLTVYEEHQKLLKELGNKKRGAENGDNEDPDKMLKGEDGSAL
PATPQPPPTMPHVPITTPPPPMMGADMSAGYGYGGWYQVEQPQYGGYGGYQQPWNYNQGY
YPPS
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atggcggcagaaggctcggactcagaagacctgagcagcaacgggctaatagaggctcct
tcagctccggaagccatggaggcggtccaacctcctccagagacggtagaggcaacagag
gagaacggtggagaactggcctcagaggcttctgaagctgcgacagcatacaacatgcct
ctggcagagaacgaggaagaggatggcgagttgccggcggactttgaccgactctggaaa
ctggcccatgacaatccacaggacttctctagctggactgacctgctgcagtactgtgag
caagagagtcacatgactgcatcgcggcggtcactggtggcctttctggcacggtacccc
ctgtgctacgggtactggaagaagtttgccgacctggagcgacgtgctggctacaccaat
aaggctcaggaggtgtgcgtgcaaggtctgaaagccatccctctgagtgtagatctgtgg
atccactacattaacctgctgctgggcacactcaacatgaacctggccgagtcgtctcag
cgcatacgcagtgcgtttgaggaggcggtggctgcagcagggctggatttccactcagac
cgcctgtgggagctctacatagagtgggagaaggagcagggagacatgagggctgccagt
ggagtttacgacagagtcctcagagtacccacccagctctacagcagccactacgacaaa
ttcaagactcacctcaatacccatgcaccaaaggatgtcctctcagcagaggagtatggg
aggttacttgaggaatgtaaacagagccacaaaattgagaaggctgagcaggctgagggg
gaggaggagatcccccctggagaggagaaggagcctacagaggaagagttaattccaaag
atgcgtgagcttctattggctcgcagggagaaggtattccaggacctagagggtgaggtc
aggaagaggtggaactttgaggacgctatcaagcgtccgtatttccatgtgaagccattg
gaccggacccaactccgggcctggcactcctacctggactgggagctcacccagctggac
gctggggatgaacaggaagtgaggactgaggtggaaccagagggcatggagggctgggaa
gaaattaaaaaggaggacaacaatgggtcaaatagcagcgggattgtcgccgggggtgac
caaagagtgcgaattttgtttgagcgctgtctgattgcctgcgctctctacgaagagttc
tggaccaagtacattcagtacctggagccccagagcctggatgaggcgcgggccgtgttc
agacgagcctgtgagatccacctggcccacaaacacaccatgcatctgcagtgggccacg
tttgaggagagacacggtgacctaaacgaggcgcgtcgggtgttagaggccctggaaacc
tctgtccccgggttggctatggttcggctgcgcagggcggggctagagagaagggcgggt
cggctagatgaatctgaagcgctgctcagagacgcggtggcccaggccaaagagacacca
cacctccatgcattctactccatcaaactcgcccgtctgcttctgaagctctgcaagaat
cccagcaaggcgcggggtgttctccaggaggcgctggagatcagcccggataacagtaaa
ctgcacctaaacctgctggagttggaggtgtctggtgaccccagagggtcagccgaaggt
gtgcagctgtgtgtgtctcgagcactggctgcacccctttccccacggaccaagatcctc
ttctcccagaggggcctgcagtacgctgaggactacgggacatctgtgcacagtgtcctg
accgtctatgaggagcatcagaagctgctgaaagagctcggcaacaagaagagaggggct
gagaacggagacaatgaggaccctgacaaaatgctaaaaggagaagacggatccgctttg
cccgccacaccacagccccctcccacaatgcctcatgttcccataacaacaccaccacca
cccatgatgggtgcagacatgagtgcgggctatggatatggaggctggtatcaggtagag
cagccacagtatgggggatatggaggctaccagcaaccctggaactacaatcagggttac
taccctcccagctaa
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