Esox lucius (northern pike): 105027195
Help
Entry
105027195 CDS
T04894
Symbol
sh3tc1
Name
(RefSeq) SH3 domain and tetratricopeptide repeat-containing protein 1 isoform X1
KO
K24313
SH3 domain and tetratricopeptide repeat-containing protein
Organism
els
Esox lucius (northern pike)
Brite
KEGG Orthology (KO) [BR:
els00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
els04131
]
105027195 (sh3tc1)
Membrane trafficking [BR:
els04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
105027195 (sh3tc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_12
TPR_2
TPR_1
TPR_8
TPR_7
TPR_NPHP3
SH3_1
TPR_10
SH3_9
Motif
Other DBs
NCBI-GeneID:
105027195
NCBI-ProteinID:
XP_028973397
LinkDB
All DBs
Position
LG24:23172698..23194872
Genome browser
AA seq
1350 aa
AA seq
DB search
MSNAEQEFEPVSLAVGNGIETNRRCCGKELSAEDHKYHYHDHVKFGTITKSRRMEKSLSR
EASSVKGTMLMSENGFPTALPMLLAMVEGPDRLPADEGSQEVLRGKLRLLEVDSIEVNAL
FTELSARLVSVNSEENIILVTFKTFEEIWKFTTYYTMGFLGLCMENLLLDQDFWLSSLDQ
EDVGIEISIQEETLNLMYKGILMQEGSFFASCSSTQMFDSSTSGSDLYLEHGDIALFEPP
FLGSGWTVLSLGDGARGTKPKPALEPVVPFHQWFLKSCTENILVGSVKPACTFPYQFAIG
SCEATVEYDAGGPDELSLLQGDRVGIVGLLVSCFEWFTGRLERTGEVGLVMTTLVKPADD
TLCESSDIFLDKEERQFFYLKEEKIKEEMIALLKKISQNDVGSVYKLDLFSQQDSPKESP
LNCSQGKMDAHQQAELKRKIEEILKEGNVPSATVPTNGTLEDSETSWTALPSGPHFTIHP
VEEDTTTKQDQLVPLLSFLSGSDYKPEFGTLYRQTPKLLLDTFNGHLGDVDQLVAYLGVA
RETARKKRLHWSQSRLCFLLGKLCAGRSKFSQARVYFEEALSIPRDGFTDMLMLASIYAN
LAVIYLKQKNTEKYFALSERIAALLMGIPDCVSIIEKDSEVLKFILKKAVLSHNKMAEAR
SCFLLANLHWRQGEEADTVPFLERLLFLSEEPPGVRSVTHSHGYLSLGRLYSQLSLPHLC
VSSARRAMTHPSARLIDCLNGMGLVLQNTARLYGVNKQEVAIPALMAPYLSRSLSFTGGL
DGVGGNGNHTLSQTLALCLSQLFQKHGMLGHAVHSMHTVIEHYSGPSSSLSASSSSERKC
ALVWLAWLHICNSQPEVSLDILDSVLASMPDHCITQQEGLVHNMRGVALRCKGDLRRAAE
SYQAAIDVCEEFEDRANWAVAEANLSLLCLKAGAKRLGERHLTEAVRLFSELEEEGHEEN
FITVLLEMGQHCVNQGLLNRGKIYYEWALLMAIKSNHSDSQLSATQRLAHLYGAVCPDHA
QCIIYYEHQLTLLTNQGDRQKEGEVLETISQLYLSLGTERAWRLALDYTKRSLGIFIDLG
RREKEAYAWLYAGKIYHMLGQTELVDLYVQVAQDVSLSTGDTHFILHLLEAAGDVFFNSC
QEREKAICFYRDRALPIAVRTSSLEARLRLSNKLVELLLNLKMFGEAVEYAQTSLDISIT
LGDRLNERVAFHRLAYLYHCLGQFELAEHYYLKTLSLCPAPLQFDEETLYYVRVYKTLGD
IIFYDLKDPYDAAGYYHLALAAAMDLGNKKSQLQLCTRLATIYHNFLVDRELSLFFYQKA
RVFASDLNIRRINLSPSQNFHSMPHAKENL
NT seq
4053 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaacgcggaacaggagttcgaaccagtctcgcttgcggtgggtaacggaattgag
accaacagacgctgttgcgggaaagagctctccgctgaagaccacaaatatcattaccat
gatcatgtaaaatttggaaccatcaccaaaagtagaagaatggagaagtcactctccaga
gaagccagtagcgtaaagggaaccatgctaatgtctgaaaacggcttcccaacagctctt
cccatgttgctggctatggtggaggggcccgacagacttcctgctgacgaggggtcccag
gaagtgctgcgggggaaactccgcctcttggaggtcgacagcatagaggtcaacgctctc
ttcacggaactctctgcccggctggtttcagtcaacagtgaagaaaacatcatattggtc
acattcaaaacatttgaagagatatggaagttcaccacatattacacaatgggttttctg
ggtttgtgcatggagaacctgctcctggaccaggacttctggttgagttcactggaccag
gaggatgttggcatagagatatctattcaagaagagaccctcaacctcatgtacaaaggc
atcctcatgcaagagggttccttctttgccagctgtagttccacccagatgtttgacagc
tccacctctggcagtgacctgtacctggagcatggggacatagccctgttcgagcctccg
ttcctgggttcggggtggactgtcctctccttgggggatggagctcggggtaccaagccc
aaaccagccctggagcctgttgtaccattccaccaatggttcttgaaatcctgtacagag
aacatcttagtcggaagtgtcaagccagcatgtaccttcccctatcagtttgccattggt
tcctgcgaggctaccgtggagtatgacgctggtgggcccgatgagctgagcctgttgcag
ggggatcgcgttggtattgtgggcctgctggtgtcctgctttgagtggttcactggcagg
ctggagaggaccggcgaagtggggctagtgatgaccacgctggtcaagccagctgatgat
accctttgtgagtcatcagacatattcctagataaagaagaaaggcaattcttttatttg
aaagaagagaaaatcaaagaagaaatgattgccttgctcaagaaaatctcccagaatgat
gttggatctgtctataaacttgatctgtttagtcaacaggactctccaaaggaatcacct
ctaaattgttctcaaggcaaaatggacgctcaccaacaagcagaactgaagaggaagata
gaagaaattctaaaagaaggaaatgtgccttctgcaactgtgccaacaaatggaactctg
gaggacagtgagacctcttggactgcattacccagtgggcctcacttcaccatccatcca
gtagaggaagacaccaccaccaagcaagatcaacttgttcctctcctctccttcctcagt
ggctctgactacaagccagaatttggtaccctctacagacaaacaccaaaactgcttctc
gacactttcaatggccacttgggagacgttgaccaattagtggcatatttaggtgttgcc
agggaaacggctaggaagaagcgtctccattggtcccagagtcgcctctgctttcttttg
gggaaactttgcgcaggacgctcaaaattttcccaggcgagagtctactttgaagaggcg
cttagcataccaagagatggtttcacagacatgttaatgctagctagcatctacgctaac
ctagcagtgatctatctcaagcagaaaaatactgaaaagtactttgctctgtcagagcgc
atcgctgcattgctcatgggtattcctgactgtgtatctatcatagaaaaagactctgaa
gtcctcaagttcatcttgaagaaggcggtgcttagtcataacaaaatggctgaggcccgc
tcctgtttcctgctagcgaatctccactggaggcaaggcgaggaggcagacactgttccc
ttcctggagaggttactgtttctctcagaagagcccccaggtgtccggagtgtcacgcac
agccacggttacctgagcctggggaggctgtacagccagctctccctcccacacctctgt
gtcagctcagccagacgagccatgacgcatccatcggctaggctaatcgactgtctgaat
gggatggggctagtgctgcagaacacagccagactctatggagtcaacaagcaggaagtt
gccattccggctctgatggctccatatctgagtcgatcgctgtctttcactgggggatta
gatggagtcggaggcaacggcaaccacactctgagccagactttagcgctgtgcctgtcc
cagctatttcagaaacacgggatgctgggacatgcagtacattccatgcacaccgttata
gaacattatagcgggccgtcatcatcgttgagcgcctccagcagctctgaacgaaaatgt
gcccttgtgtggctagcatggctgcacatctgcaacagccaaccagaagtatctctcgac
atccttgattcagtgttggcctccatgccagaccattgcattacccaacaggaaggactg
gtccacaacatgaggggagtggctcttcgatgtaaaggagacttgcggagagctgcagag
agctaccaggcagcgatcgacgtgtgtgaggagtttgaagacagagccaactgggcagtg
gcagaggctaacctgagtttactgtgcctgaaggcaggggctaagaggctgggggagagg
catcttacagaagctgtgcggttattctctgagctggaggaagagggacatgaggagaac
tttataacagttctgttggagatgggacagcactgtgtgaaccagggactcctgaaccga
gggaaaatatactatgaatgggctctgctgatggccatcaagtcaaaccattcagacagt
cagttgagtgcgacacagcgtctggcccacctatacggagctgtatgtcctgaccacgct
cagtgcatcatctactacgaacatcagctgaccctgctgaccaatcagggagacagacaa
aaggagggggaggtcctggagaccatcagccagctgtacctaagtctggggacagagagg
gcttggcggttggctctagactacaccaagaggagcctgggtatctttatagacctgggt
cggagggagaaggaggcgtacgcctggttgtatgccgggaagatctaccacatgctgggt
cagactgaactggtggacctctatgtgcaggtggcccaggacgtaagtttgagtacagga
gacacacacttcatcctacatctactggaagcagcaggcgacgtcttcttcaacagctgt
caggagagagagaaggctatctgcttctatagggaccgtgccctgcccattgctgtgagg
accagcagtttggaggccaggctgagactgtctaacaagctggtggagctgctgctgaat
ctcaagatgtttggagaggctgtggaatatgcccagacctccttggacatcagcattaca
ttgggagatcgactgaatgagcgcgtagcattccaccgccttgcttatctgtaccactgt
ctgggccaatttgaactggctgaacactactacttgaagacgctctctctctgccctgca
cccctgcagtttgatgaggaaaccctgtactatgtcagagtttataagactttgggtgat
atcatcttctatgatctgaaggacccttatgacgcagcagggtactaccatctggcgctg
gcagcagccatggatctaggcaacaaaaagtcccagctccagctctgcacgcgattggct
accatctaccacaacttcctggtggaccgggagctctcgctcttcttctaccagaaagca
agggtgttcgcttcggacctcaacatacgccgtatcaacctctccccctctcagaacttc
catagtatgccacacgccaaggaaaacctttag
DBGET
integrated database retrieval system
