Esox lucius (northern pike): 105027200
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Entry
105027200 CDS
T04894
Name
(RefSeq) transcription factor Sox-19b-like isoform X1
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
els
Esox lucius (northern pike)
Brite
KEGG Orthology (KO) [BR:
els00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
els03000
]
105027200
Transcription factors [BR:
els03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
105027200
BRITE hierarchy
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GFIT
Motif
Pfam:
HMG_box
HMG_box_2
SOXp
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
105027200
NCBI-ProteinID:
XP_010897470
UniProt:
A0AAY5KIP0
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Position
LG24:23279480..23285055
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AA seq
299 aa
AA seq
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MYSMMEHELKPSGQQQSHQTTQGMSPVTGNIGNSHPGSKSVCPPGVDPMDKVKRPMNAFM
VWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLTDAEKRPFIDEAKRLRAVHMKDYPDYK
YKPRRKTKPLLKKDNQMGKYPLSAGNLLAAAAAQGQGGSPRMESYGWGPAGGYAGMQSEA
LGYTQQLHRYDLSALQYPQAMTAAQTYMNGANTYSPMSYSSSPQQASQVMSMVKPEPVSH
SPTGGPNHHHHHRGPLQGDLRDMISMYIPGGDNSDPASQRGGYSVQQHYLGGTVPLTHI
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgtatagcatgatggaacacgagctgaagccctccgggcaacagcagtcgcaccaaacc
acccagggcatgtctcccgtaaccggcaacataggcaactctcatccagggtcaaaatcc
gtgtgccctcctggcgttgaccccatggacaaggtgaaaaggccaatgaacgcctttatg
gtctggtccaggggccagcgtcgcaagatggcacaggagaaccccaagatgcacaactct
gaaatcagtaagcggctgggcgcagagtggaaactactgactgacgcagagaagcggccg
ttcattgacgaagccaagcgcctcagggcagtgcacatgaaggattatcccgactacaag
tacaagccacgccgcaagaccaagcccctgctcaagaaggacaaccagatgggaaagtac
cctctctctgcgggtaacctcctggccgcggctgccgcacagggccaaggggggagcccc
cggatggaaagctacgggtggggcccagctggaggttacgccgggatgcagagcgaggcc
ctcggatacactcagcaactgcatcgctacgacctgtccgcgctccagtacccacaagcc
atgactgcagcacagacgtatatgaacggcgcaaatacgtacagccccatgtcctacagc
agcagcccccagcaggccagccaggtgatgtctatggtgaagccggagccggtgtctcac
tcgccgaccggtggccctaaccaccaccaccaccaccgcgggccactccaaggggacctg
agggacatgatcagcatgtacatccctgggggggataacagtgacccggcctcccagagg
ggtggctacagcgtccagcagcactacctaggcggtacggtgcccctcactcatatctga
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