Esox lucius (northern pike): 105027427
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Entry
105027427 CDS
T04894
Name
(RefSeq) probable global transcription activator SNF2L2 isoform X4
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
els
Esox lucius (northern pike)
Pathway
els03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
els00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
105027427
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
els03021
]
105027427
03036 Chromosome and associated proteins [BR:
els03036
]
105027427
Transcription machinery [BR:
els03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
105027427
Chromosome and associated proteins [BR:
els03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
105027427
Chromatin remodeling factors
BAF complex
105027427
PBAF complex
105027427
GBAF(ncBAF) complex
105027427
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
HSA
BRK
QLQ
ResIII
HDA2-3
DEAD
Bromodomain
Motif
Other DBs
NCBI-GeneID:
105027427
NCBI-ProteinID:
XP_019908188
LinkDB
All DBs
Position
LG13:complement(419423..487999)
Genome browser
AA seq
1475 aa
AA seq
DB search
MSTPMEQAGGMSQTHPGPSPGPGPSPGPGPSPGPGPSPGSVHMMGPSPGPPILQGPLAGD
YLQDTMHTMHKPLEGLHEKGMVEDMNYGQMKGVGMRALHSGMGPPQSPLDQHSNQGYMSP
HPSPMGVQEHASSPLSRGGPTPPMAPASGPMMPQMDPQSALGPQGPQGRGPSSFSPVQLQ
QLRAQILAYKILGRGQPLPENLQLAVQGKRSLPTMQQQQQQQQPGTGSPYIRSPGMAMAS
MSGPPSGLGPTPSMPGHTQTPGSKPWPEGQGNENPNNPQKMLAPPLSGRPSPAPPQAPPP
GPMSGPSIPHQPQGQQPSPVITLQQKQNRVTPIQKPQGLDPTEILQEREYRLQARIAHRI
QELESLPGALPPDLRSKATVELKALRLLNFQRQLRQDVVQCMRRDTTLETALNSKAYKRS
KRQTLREARMTEKLEKQQKMEQERKRRQKHQEYLNSILQHAKDFKEYHRSISGKMQKLTK
AIATWHTNTEREQKKETERIEKERMRRLMAEDEEGYRKLIDQKKDKRLAYLLQQTDEYVA
NLTDLVYEHKAAQAANMKKKKKKKKKKVDDSGEGMSGLGPDGEPMDDSSQMSELPVKVIQ
TETGKVLQGVDAPKSSQLEAWLEMNPGYEVAPRSDSEESGSEFEEEEEEEIPGVSSRPDS
QTEEKKIFHPNSDELPEIAAKQIIESAKQDVDDEYTVPETELTVFQQSYYGVAHAIIERV
EKQSSLLINGTLKHYQVQGLEWMVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRL
NGPYLIIVPLSTLSNWVYELDKWSPSVVKIAYKGTPAMRRGLVAQLRSGKFNVLLTTYEY
IIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLTGTPLQNKLPELW
ALLNFLLPTIFKSCNTFEQWFNAPFAMTGERVDLNEEETILIIRRLHKVLRPFLLRRLKK
EVESQLPEKVEYVIKCDMSAIQRVLYRHMQGRGILLTDGSEKDKKGKGGAKTLMNTIMQL
KKICNHPYMFQHIEESFAEHLGYPNGVISGHELYRASGKFELLDRILPKLHSTKHRVLLF
CQMTSLMTIMEDYFSYRNFLYLRLDGTTKSEDRAALLKKFNEKGSQYFVFLLSTRAGGLG
LNLQAADTVVIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLCTVNSVEEKILAAAKYKL
NVDQKVIQAGMFDQKSSSHERRAFLQAILETEEQNEVGHGGVGIKIKCSALQEEERGQVA
MEEDEVPDDETLNQMIARNEEEFELFMRMDLERRREDARNPKRKPRLMEEDELPSWIVKD
DAEVERLTCEEEEEKIFGRGSRRRGDIDYSDALTEKQWLRAVEDGNLEEMEEEIRLKKSR
KRRRRGDKDGRREEAGEKAKKRRGRPPAEKLSPNPPKLTKQMNAIIDTVINYRDGSNRQL
SEVFVQLPSRKELPEYYELIRKPVDFKKIKVKVQL
NT seq
4428 nt
NT seq
+upstream
nt +downstream
nt
atgtccacccctatggaacaggctggtggcatgtcccagacccacccgggcccctcccca
ggaccaggcccctccccaggaccaggcccctccccaggaccaggcccctccccaggctct
gtacacatgatgggtcctagccctggcccccccatcctacagggaccattggctggggac
taccttcaggacaccatgcacaccatgcacaagccattggagggtcttcatgagaaaggg
atggtagaggacatgaactatgggcagatgaagggtgttgggatgagggctttacatagt
ggcatggggcctccacagagccccttggaccagcacagcaaccaaggctacatgtccccc
cacccttcccccatgggtgtccaagaacacgcctccagccccctgtcccggggcgggcct
acgcctcccatggctcctgcctcgggccccatgatgccccagatggacccccagtcagct
ctgggtccccaggggcctcaaggccgtggcccctcctccttcagccctgtccaattacag
cagcttcgggcccagatcctggcatataagatcctggggaggggccagccattacctgag
aacctgcagcttgcggtccagggaaagaggagtctacccaccatgcagcaacaacaacag
caacagcaaccgggcacaggcagcccatacatcagatcccctggtatggccatggcatcc
atgtctggccctccgtcaggccttggccccacccccagcatgccaggacacacccagacc
cctgggtccaaaccctggcctgaaggtcagggtaatgagaatcctaacaacccccagaaa
atgctagccccgcccctcagtggaagaccctctcctgcccctcctcaagcccctccgcct
ggccccatgtccggtccctccatcccccatcagccccaggggcagcagccgtcccctgtc
atcacactgcaacagaaacagaaccgtgtcacgcccattcagaaaccacaaggtctggac
cccaccgagatcctgcaggaacgggagtacagactacaggctcgtatcgcccaccggatc
caggaactggagagtctgcctggagctctgcctccagacctgaggagtaaagccactgta
gagctcaaggctctgagactactcaacttccaaagacagcttcgtcaggatgtggttcaa
tgcatgcgtagagacaccaccctggagacagcgctgaactcaaaggcctacaagaggagc
aagcgccagacgctgagggaggcccgcatgacagagaaactggagaaacagcagaagatg
gaacaggagaggaaacgaagacagaaacaccaggagtatctgaacagtattttgcagcat
gccaaggactttaaggagtaccatcgctccatctctggaaaaatgcagaagctgactaag
gccatcgccacctggcacaccaacacagagagagagcagaagaaagagacagagaggatt
gagaaggagaggatgagaagactcatggcagaggatgaggagggctacaggaaattgatc
gaccagaagaaggacaaacgtctggcgtacttgctgcaacagacggacgagtacgtggcc
aacctgactgaccttgtttacgaacacaaggctgctcaggccgcaaacatgaagaagaag
aaaaagaagaagaagaagaaagtggatgacagcggagaggggatgagtggcctcgggcct
gatggagagcccatggatgatagcagccagatgagcgagctgccagtcaaggtgatccag
acagagacaggcaaggttctacagggggtggacgcccccaagtcttcccagctggaggcc
tggctggagatgaaccctggatatgaagtggccccgaggtcggacagcgaagagagcggc
tctgagtttgaggaggaggaagaggaggagattccaggagtgtccagtaggccagactct
cagactgaggaaaagaaaatattccatcccaacagtgacgagttaccggagatcgctgcc
aagcaaataatcgagtctgccaagcaggatgtggatgatgagtacacggtgccagagact
gaactgaccgtcttccaacagtcttactatggagtggctcacgccatcatcgagagggta
gagaaacagtcatcactgctcatcaacggcactctcaaacactaccaggtccagggtctg
gagtggatggtgtctctatacaacaacaatttgaatggaatcctggctgatgagatgggg
cttgggaagaccattcagactattgcactcatcacatacctgatggaacacaagagactc
aatggaccttacctaatcatcgtaccactctcgactctgtccaactgggtttatgagctt
gacaagtggtctccatctgttgtcaagattgcctacaagggcactcctgctatgcgacgg
ggcctggttgctcaactccgcagtgggaagttcaatgtcctgctcaccacgtatgagtac
attatcaaggacaagcacatcctggccaagatccgttggaagtacatgatagtggatgag
ggccaccgtatgaagaaccaccactgtaagctgacccaggtgttgaacacccactacgtg
gccccccggcgcctcctgctgacgggtacccctctgcagaataagctccctgagctctgg
gcgcttctcaacttcctgctgcccaccatcttcaagtcctgcaacacctttgagcagtgg
tttaatgccccttttgccatgacaggggagagggtggaccttaatgaggaagagaccata
ctgattatccggcgtctccacaaggtgctccgccccttcctcttgcgtcgactcaagaaa
gaagtggagtcccagttaccagagaaggtggagtatgtgatcaagtgtgacatgtcggcc
attcagagggttctgtaccgccacatgcagggcagaggaatcctcctcactgatgggtca
gagaaagacaagaagggtaaaggaggtgcgaaaactctgatgaatactatcatgcagctg
aaaaagatttgcaaccacccctacatgttccaacacattgaggagtcctttgctgagcat
ttaggctacccaaatggagtcatcagtggacatgagctctaccgtgcttcagggaagttt
gagctgctggaccggatccttcccaagttgcacagcacaaaacaccgggttctgctgttc
tgccagatgacctccctcatgaccatcatggaggactacttctcctaccgaaacttcctg
tacctccgccttgatgggaccaccaagtcagaagaccgcgcagcgctgctaaagaagttc
aatgagaaaggttcccagtactttgtgttcctgctaagtacacgagcagggggacttggc
ctcaacctgcaggctgctgacactgtggtcatcttcgactctgactggaaccctcaccag
gacctccaggcccaggacagggctcatcgtattggtcagaagaatgaagtgcgtgttctg
cgtctgtgcactgtgaacagcgtggaggagaagatcctggcggctgcaaagtacaaactg
aacgttgaccaaaaggtcatccaggccggcatgtttgaccagaagtcttcaagccacgag
aggagggcattcctgcaggccatactggagacagaggaacagaatgaggttggtcacggt
ggcgtgggaataaagattaaatgcagtgccttgcaggaagaagagaggggtcaggtggct
atggaggaagatgaggtccctgatgatgagactctgaatcagatgattgctcgtaatgag
gaggagtttgagcttttcatgcgaatggacttggagcggcgaagggaggatgccaggaac
cccaagaggaagccccgtctgatggaggaggatgagctgccatcttggatcgtcaaggac
gacgcagaggtggagcggctcacctgtgaagaagaagaggagaagatctttggccgaggt
tcccgcaggagaggcgacatcgactacagcgacgccctgacagagaaacagtggctcagg
gctgtagaggatggcaatctggaggagatggaggaagagatccgtctgaagaagtcaagg
aagaggaggagacgaggggacaaggatggacggagggaggaggcaggagagaaagccaag
aaaaggcgtggacgccctcctgctgagaagctttcccccaaccccccaaaactaaccaaa
caaatgaatgccatcatcgacaccgtcatcaactacagagacggatctaacagacagctg
tcagaggtgtttgtccagcttccatccagaaaggaactccctgagtactacgagctgatt
aggaaacctgtcgacttcaagaagatcaaggtaaaggtccagctgtaa
DBGET
integrated database retrieval system
