Esox lucius (northern pike): 105027586
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Entry
105027586 CDS
T04894
Symbol
gapvd1
Name
(RefSeq) GTPase-activating protein and VPS9 domain-containing protein 1 isoform X4
KO
K27566
GTPase-activating protein and VPS9 domain-containing protein 1
Organism
els
Esox lucius (northern pike)
Brite
KEGG Orthology (KO) [BR:
els00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
els04131
]
105027586 (gapvd1)
Membrane trafficking [BR:
els04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
105027586 (gapvd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RasGAP
VPS9
DUF5601
DUF5740
Motif
Other DBs
NCBI-GeneID:
105027586
NCBI-ProteinID:
XP_019908230
LinkDB
All DBs
Position
LG13:23165423..23218117
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AA seq
1480 aa
AA seq
DB search
MVKPDIHTLAHHLKQERLYVASEKQLIQRLNGDVLKTAERLYRAAWITKQQRINLDRLIL
TSAEASPAECCQHAKVLEDTQFLDGYKTLGFQESIYGEFLGRVRENPRLVASCLVAGEKL
NQEHTQGVINTVFTSLYGNCIMQEDESYLLQVLRYLVEFELKESDNPRRLLRRGTCAFSI
LFKLFSEGLYSAKLFLTATLHEPIMQLLVEDEDHLETDPSKVTERFTPAQQERLFGEKGS
ESYRQKVTAAVEANEAKLVTLVNKFIGYLKQNTYCFPHNLRWIVSQMYKTLSCVDRLEVG
EVRTMCTDLLLTCFICPAIVNPEQYGIISDAPINEVARFNLMQVGQLLQQLAMADDDGDP
RRKNCLAKFDKSCVAAFLDVVIGGRTVETPPMSSMNLLEGLSRTVAYMTHSQLLCLVDFV
RSVMTGDHLREEEHMLLETLLANVPQSCTVKSNSLELTPSNTPQLSPATTPANKKNRNIG
QQLATSWDSTTTTLSAQIPLVTPFAASRSRSRTELSQQGEAEASSLESLQEVMPEEVLVI
SLGTSPQTIPGMMSENEVLTIQLADGAQGDTPADETKLHGKPDKTLRFSLCSDNLEGISE
GPSNRSNSVSSLDLEGESVSELGAGPSGSNGVEALQLLEHEQATTQDNLDDKLRKFEIRD
MMGLTDDRDISETVSETWSTDVLGSDFDPNMDEDRLQEIAGAAVENMLGSLLCLPGSSSV
LLDPYGSTISETTSEAWSVEVLPSDSEAPDLKQEERLQELESCSGVGSTSDDTEVREVSS
RPSTPGLSVVSATSEDIPNKTEDLRSECSSDFGGKDSVTSPDGEESAHGPHHSLTSPPSQ
TDSLLAMFDPLSSGEGSSTGTIVRPKVHYARPLHPPPDPPIPEACALVQEPRHSLFMSHC
LAQVELEHTKQRHSYPDRLVRSRSSDIVCPGRRPTSDPGLNRRAAAEERDPAGAFSMGPS
SSPSKDSLKGEVEERNYSDEEKSDRNRPWWKKRFQSAIPKVLYWTAESEVPAPIAAFRKR
DKQEKDDIGHERVPQDDPLPRNSHAQAAEDILDKYRNIKRTSPNEGATTAAYDASGEPCG
EESVHDSLRDEAMQNISTDDLPDSASQTAQQHDSKFSFSDAKKKLRLALCSADSVAFPLM
APATTRNGLPDHTDSEDNEIVCFLKVQLAEAINLQDKNQMAQIHETTRCVSRFDARTCRK
LLAAIADDYRKRAPYIAYLTRCRQGLQTSQAHLERLLQRVLRDKEVANRYFTTVCVRLLL
EHMEAKMLDFIKAFQGYTASDDKTAAVEDFLRYLYGAMAHDATWQYASEDQLQDAQMAIE
RSVMNRIFKLAFYPNQDGDILRDQLLQDHIARLSKVVTVNHKALQIPEVYARESPWPSAQ
SEIRTISAYKTPRDKVQCILRMCSTIMNLLSLANEDSVPGADDFVPVLVFVLIKANPPCL
LSTIQYINNFYASRLSGEECYWWMQFTAAVEFIKTIDDRK
NT seq
4443 nt
NT seq
+upstream
nt +downstream
nt
atggtgaagccagacatccacactctggcccaccacctgaaacaagagcggctgtatgta
gcttcagagaaacagttgatccagcggctcaatggggatgtgctgaaaactgctgagagg
ctgtaccgtgctgcttggatcaccaaacagcagaggatcaaccttgaccgcctcatcctt
accagtgctgaggcttccccggctgaatgctgccaacatgccaaagtgctagaagataca
cagttcctggatggctacaagactctgggcttccaggagagcatctatggggagttcctg
ggtcgggtacgtgagaaccctcggctggtggcctcctgtctggtggctggggagaagttg
aaccaggagcatacacagggtgtcattaacactgtgttcacctcactatacggcaactgt
atcatgcaggaggacgaaagctacctgttgcaggtcttacgctacttggtggagtttgag
ctgaaggagagtgacaatcctcggcggctgctgcggcggggcacatgtgcttttagcatc
ctcttcaaacttttttctgaggggctgtactccgccaagctcttcctcactgccaccctc
cacgaaccaatcatgcaactactggtggaagatgaggatcacctggagacggacccttcc
aaggttacggagcggttcacgccggcccagcaagagcgtctgtttggtgagaagggctct
gagagctaccggcagaaagtgacggccgctgtagaggctaacgaggccaagcttgtgacg
ctggtgaacaagttcattggctacctgaagcagaacacctactgcttcccccacaacctg
cgctggatagtgtctcagatgtacaagacgctgtcatgtgtggaccggctggaggttggc
gaggttcggaccatgtgcacggacctgctgctcacctgtttcatctgtccagccattgtc
aaccctgagcagtatggaatcatctcggatgcccctatcaacgaggtggcccgatttaac
ctcatgcaggtggggcagcttcttcaacagttggcaatggctgatgatgatggagacccc
aggcggaaaaactgtttggccaagtttgataagagctgtgtagctgccttcctggatgtg
gtcattggtgggagaactgtggagacaccacccatgtcctctatgaacctacttgaaggc
ctcagcaggactgtggcatacatgacgcacagtcagctgctctgtctggtggactttgtg
cggagtgtgatgacaggggaccacctcagggaggaggagcacatgctcctcgagaccctt
ctggccaatgtcccgcagtcctgcactgtgaagagcaacagtctggagcttaccccctcc
aacaccccccagctctccccagctaccaccccagccaacaagaagaacaggaatatagga
caacagttagctacatcctgggactccacaaccaccaccctgtctgctcaaattccgtta
gttaccccttttgcagcctcccgtagtcgtagccgtaccgagctgtcacagcagggggag
gcagaggcaagctccctggagtctttacaggaggtgatgccagaggaggtgctagttatc
tcactaggaaccagcccccagactattccagggatgatgtcagagaatgaggtgttgacc
atacaactggctgatggggcgcaaggagacactcctgcagatgagaccaagcttcatggg
aagccagacaaaactttgcgcttctccctttgcagtgacaacctggagggcatctcagag
ggtccgtccaaccggtctaactctgtgtcctctctggacctggagggagagtctgtgtca
gagctgggagctggaccgtcagggagcaatggagtggaggctctacaactgctggagcat
gaacaggccaccactcaggacaaccttgatgataaactgcgaaagtttgagatccgagac
atgatgggtctaaccgatgaccgggacatctcagagactgtgagcgagacctggagcacg
gatgtgctgggcagcgactttgaccccaacatggatgaggatcgactgcaggaaatagct
ggagcggctgtggagaacatgctgggcagcctgctgtgtctgccaggctccagctcagtc
ctgctggacccctatggatccaccatctcagagaccaccagcgaggcctggagtgtggag
gttctgcctagtgactcagaagccccagacttgaagcaggaggagcgtctgcaggagcta
gagagttgttcgggtgtgggcagcacctcagatgacacagaggtcagagaggtcagctct
cggcccagcacaccagggctcagtgtcgtttcagcaacatcagaagacatcccgaacaag
actgaggacttgcggtcggaatgcagttcagactttggagggaaggactctgtgaccagt
ccagacggggaggagtctgctcatggaccgcaccacagtttgacatctccaccttctcag
acagattccttactggccatgttcgatcccctatcctccggtgaaggttcctccactggt
actattgtgaggcctaaagtgcactacgccaggccccttcaccccccccctgatcctccc
atcccagaggcctgtgccctggtccaagaaccccgccactccctgttcatgtctcattgc
ttggcccaagttgagctggaacacaccaaacagcgccactcctacccagacaggctggta
cgtagtcgcagttctgacattgtgtgcccgggccgccggcccacaagtgacccgggcctc
aaccgtagggctgcagctgaggagcgggaccctgccggggccttctccatggggccatcc
tcgtcccccagcaaggactccctgaaaggagaggttgaggagagaaactacagtgatgag
gaaaagtctgatcgcaaccgaccatggtggaagaaacgctttcagtcagccattcccaaa
gtgctgtattggaccgctgagagtgaagtcccagctccaatagcagccttccggaaaagg
gacaagcaggagaaagacgatataggccatgaacgcgtcccacaagacgacccgctgccc
aggaactcccatgctcaggctgcagaagacatcctggacaagtataggaacatcaagaga
accagtcccaatgaaggagctaccactgcagcctacgatgccagtggtgagccgtgtgga
gaggagagtgtgcatgactccctccgagacgaagctatgcaaaacatctccacagatgac
ctgcctgactcagccagccagacagcccagcaacacgactccaagttctcattcagtgac
gcaaagaagaagttgagactggctttgtgttcagcagactctgtggctttccccctcatg
gctcctgccacaacacgcaatggtctgccagaccacacagactctgaagacaatgagatc
gtgtgcttcctgaaggtccagctggcagaggccatcaacctgcaggataagaaccagatg
gcccagatccatgagactacacgctgcgtcagccgatttgacgcacgcacctgcaggaag
ctgctggcagccatcgccgatgattacagaaagcgggccccctacatagcttatcttaca
cgatgtcggcagggcctgcagacatctcaggcccacctggagcgtctcctgcagagggtg
ctgagggacaaggaggtggctaaccgctacttcaccactgtctgtgttcgcctcctactg
gaacatatggaggctaagatgctggatttcatcaaagcttttcagggctacacagcatca
gacgacaagactgcagcagtggaggatttcctgcgctacttgtacggggccatggcccat
gatgccacctggcagtacgccagcgaggaccagctgcaggatgcccagatggccatcgag
cgcagcgtcatgaaccgtatcttcaaactggccttctaccctaaccaggacggggatatc
ctgagagaccagcttctgcaggaccacatagcgcgtctctcaaaagtggtgacagtgaat
cacaaagctcttcaaatcccagaggtgtatgcaagggagtctccctggccatctgcccag
tcagagattcggaccatcagcgcctacaagaccccgcgggataaagtgcagtgtatattg
cgcatgtgttccaccatcatgaacctactgagtttggccaacgaggactctgtccctgga
gctgatgactttgttcctgtgctggtctttgtgctgataaaggcaaacccgccctgcctt
ctgtccactattcagtacatcaataatttctacgccagccggctgagtggggaggagtgc
tattggtggatgcagttcaccgcggcagtggaattcattaagaccatcgacgatcgcaag
tga
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