Esox lucius (northern pike): 105027816
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Entry
105027816 CDS
T04894
Symbol
ddx31
Name
(RefSeq) probable ATP-dependent RNA helicase DDX31
KO
K14806
ATP-dependent RNA helicase DDX31/DBP7 [EC:
5.6.2.7
]
Organism
els
Esox lucius (northern pike)
Brite
KEGG Orthology (KO) [BR:
els00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
els01009
]
105027816 (ddx31)
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
els03009
]
105027816 (ddx31)
Enzymes [BR:
els01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
105027816 (ddx31)
Protein phosphatases and associated proteins [BR:
els01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
105027816 (ddx31)
Ribosome biogenesis [BR:
els03009
]
Eukaryotic type
Pre-60S particles
Helicases
105027816 (ddx31)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
Motif
Other DBs
NCBI-GeneID:
105027816
NCBI-ProteinID:
XP_010898397
LinkDB
All DBs
Position
LG13:35591167..35630825
Genome browser
AA seq
736 aa
AA seq
DB search
MAEDTLMLNLRSDSVPYFQRPATSKEKWASKKAQKRKSSGIQVAPSKRGFYSFEKDPKTK
DILSHEDTEEENEQTNQVTVSKPAPKAAAKALSSEISKPAQSNQTQPKSKSKHVGEHKGD
DRAFIKTSSLFKNNPDIPDVHRPAVTQLKEKVFTSDSFAEQDLHPHLVATLTKVLNVTSM
TSVQKETIPVLLSGRDAVVRSQTGSGKTLAYGIPLVQSLQAVEPKIKRGDGPLAVIVVPT
RELAQQSFQIFQKLLKPFTWIVPGVLMGGEKRKAEKARLRKGINILITTPGRLVDHIKNT
LSIAFSAVRWLILDEADRILDLGFEKDLMVILNSLNSTGPPRQNVLLSATLTDGLSRLAG
ICMKEPVSIHVGENAVLSSKSTPNPDTAQGQPDSFAVPERLQQHMVVVPSKLRLVCLAAF
LLSKCKFEKDHKIIVFVSSCEAVEFLLTLFNAVLCGPKAKQQPLLSFFRLHGNMKQEERT
EVFHDFSVCKTGILLCTDVAARGLDLPQVTWIVQFNPPSTPAEYVHRVGRTARIGEKGSS
LLFLTPAETAYVTSLANHNISISEMKLETILSTLMLDDRFTVRGKYDSKKSSGALEQEVR
ERATVLQTEFENFVHADDNSVQVAKRALQSFLRAYTAYPSSMKHIFHIKTLHLGHAAKSF
GLRDAPQGLVSSGNGSNKDRGQTKNKDKRPPMKKLSAKEREASLMRSEYACGIDGNSKKK
KRKKKTHAEGEEDSID
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atggcagaggatacattgatgctgaacctcaggtctgactcggttccatattttcagaga
ccggcaacgtctaaggagaaatgggcttcgaaaaaggcacagaaacgaaagtcctcagga
atacaagtggcacccagtaaacgagggttctattcttttgaaaaagatccaaagaccaag
gacatactttcccatgaggacactgaagaagagaatgaacagaccaatcaggttactgtc
tctaaaccagcacctaaggctgcagccaaagccttgtcttctgagatctccaaacctgcc
cagagtaatcaaactcagccaaaatcaaaaagtaaacatgtaggggaacacaaaggagat
gacagagcattcataaagacttcttccttatttaaaaataacccggatatcccagacgtc
cacaggcctgctgtgacccagttaaaggagaaggtgttcaccagtgattcctttgcagag
caagaccttcacccccacctggtggcaacgctaacaaaggtgctcaacgtgaccagtatg
accagtgtccagaaggagaccatccctgttctcttgtccggtcgagacgctgttgtgcgt
tcccaaactggatcaggaaaaactcttgcctacgggataccacttgtccaatctttacaa
gcagtggaacccaaaattaagagaggggacgggcctctcgcagtcattgtggttcccacc
agagagctggcccagcagagcttccagatcttccagaagctcctgaagcctttcacttgg
attgttcctggagtcctgatgggaggagaaaagaggaaggcagagaaagccaggttgcgt
aaagggatcaacattctaatcactacaccaggccggctagtggaccacatcaagaacacc
ctgagcatcgcctttagcgcggtccgctggctcatcctggatgaggctgaccggattctg
gacctgggctttgagaaggatcttatggtgatcctcaactctttgaattccaccggacct
cccaggcagaatgtcctcctatctgctacgctcacagatggtttgtcccggttagcaggg
atctgcatgaaggagccagtcagcatccatgtgggggagaatgcagtgttgagcagcaag
tcgacccccaatcctgacactgcccagggccaaccggatagctttgccgtgcccgagaga
ctgcagcagcacatggttgtggtgccaagcaaactcagacttgtttgcctggcagccttc
ctcctctccaagtgcaagtttgagaaggatcacaagatcatcgtgtttgtgtcgagttgc
gaggcggtggagttccttctgacactcttcaacgctgtgctctgtggaccaaaggccaag
cagcagcccttgttgagcttcttccgtctccatggcaacatgaaacaggaggaaaggact
gaagtatttcatgacttctctgtctgcaaaactggtattcttctttgtacggatgtggcg
gcccgtggactcgatctgccccaggtgacgtggattgtccagttcaaccctccctccact
ccggctgagtatgtgcatcgcgtgggccgcacggcccgtataggagagaagggaagcagc
ctcctcttcctcacccccgctgagaccgcctacgtcacttccctggccaatcacaatatc
agcatttccgagatgaagctggagacaattttgtcaacgctgatgctggatgaccgcttc
acagtcaggggaaagtacgacagcaagaagtcttctggtgctctggagcaggaagtgcgg
gaaagagccactgtgctacagacagagtttgagaactttgtccatgccgatgataactct
gtccaagtagccaagagagccttgcagtccttcctgcgggcgtacaccgcctacccatcc
agcatgaagcacatcttccacatcaaaacactgcacttgggacatgccgccaagagcttt
ggcctgagggacgccccgcagggccttgttagcagcggcaatggctccaataaggaccgg
ggtcaaaccaagaacaaggacaaaagacctcccatgaagaagttgagtgccaaagagcgg
gaggccagtctcatgcgctcagaatacgcttgcgggatagatgggaactccaaaaagaaa
aagagaaagaagaagactcacgctgagggggaggaagacagcatagactag
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