Esox lucius (northern pike): 105027838
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Entry
105027838 CDS
T04894
Name
(RefSeq) zinc finger protein ubi-d4 isoform X3
KO
K13196
zinc finger protein ubi-d4
Organism
els
Esox lucius (northern pike)
Pathway
els03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
els00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
105027838
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
els03041
]
105027838
03036 Chromosome and associated proteins [BR:
els03036
]
105027838
Spliceosome [BR:
els03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
105027838
Chromosome and associated proteins [BR:
els03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
105027838
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPF1-3_N
PHD
PHDvar_NSD
PHD_2
zf_RING_Vps8
PHD_4
Motif
Other DBs
NCBI-GeneID:
105027838
NCBI-ProteinID:
XP_012989811
UniProt:
A0A3P8YMR0
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All DBs
Position
LG07:complement(38429769..38447419)
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AA seq
413 aa
AA seq
DB search
MAAVVENVVKLLGEQYYRDAMEQCHNYNARLCAERSVRMPFLDSQTGVAQSNCYIWMEKR
HRGPGMAPGQLYTYPSRRWRKKRRAHPPEDPRLIFPPLKSELDLGLKKDSLSSDGSSLEA
LLKGEPLDKRAPELRGPEEEPSLADYTSVVPPVTRVRKRVLEPDDFLDDLEDEDYEEDTP
KRRGKGKGKGRGVSSAKKKLDAAAAALEDKDRPYACDNTFKQKHISKPSERVCGKRYKNR
PGLSYHYTHSHLAEEEGEDKEELEIPPPTPPQPEETKTPKKGPDGLAIPNNYCDFCLGDS
ALNQKTGLSEELQSCSDCGRSGHPSCLQFTPVMMAAVKTYRWQCIECKCCNHCGTSENDD
QLLFCDDCDRGYHMYCLNPPMAEPPEGSWSCHLCLELLKDKASIYQSPNAPPS
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atggcggctgttgttgaaaatgttgtcaaactgctgggggagcagtactacagagatgcc
atggagcagtgccataactataatgcccggctatgtgctgaaaggagcgttcggatgccc
ttcctggactctcagactggagtggcacagagcaactgttacatttggatggagaagaga
cacagaggaccaggcatggctccgggccagctgtacacctacccatcccgcaggtggagg
aagaaacgcagagcccaccctccagaggacccccgtctcatcttccctcctttaaagtcc
gagctggacctggggttgaagaaagactccctgtcctccgacggtagcagtctggaggcc
ctgctgaagggggaacccctggacaaacgggctcctgagcttcgtgggcctgaggaggaa
cccagcctggctgactacactagtgtggtccccccggtgacgcgtgtcaggaagagagtc
ctcgagccagatgacttcctggatgacttggaggacgaagactatgaggaagacaccccg
aaaagaagaggcaaaggcaagggaaagggtcgcggagtgagcagcgccaaaaagaagctc
gatgctgcagcagctgcgctggaggacaaggacaggccttacgcctgtgacaacactttc
aaacaaaagcatatttcaaaaccttctgaacgagtctgtgggaagcgttacaagaaccgt
ccgggcctgagttaccactacacccactcccacctggctgaggaggagggtgaggacaag
gaagagctggagatccccccgccgaccccaccccagcccgaggagaccaagacgcccaag
aaaggtccggatggtttggccatacccaataactactgcgacttctgtctgggagactcc
gccctaaaccagaagacgggcctgtcagaggagctgcagtcctgttcggactgcggacgt
tcaggccacccgtcctgcctgcagttcaccccagtgatgatggccgccgtgaagacctac
cgctggcagtgcatcgagtgcaagtgctgcaaccactgtggcacctcggaaaacgacgac
cagctgctgttctgtgacgactgtgatcgaggctaccacatgtactgcctcaacccaccc
atggctgaacccccagaagggagctggagttgccatctgtgtctggaactgttgaaagac
aaagcgtccatataccagagccctaacgcccctccatcatga
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