Esox lucius (northern pike): 105027990
Help
Entry
105027990 CDS
T04894
Name
(RefSeq) collagen alpha-1(VIII) chain isoform X1
KO
K23455
collagen type VIII alpha
Organism
els
Esox lucius (northern pike)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C1q
BclA_C
Motif
Other DBs
NCBI-GeneID:
105027990
NCBI-ProteinID:
XP_019897660
LinkDB
All DBs
Position
LG22:complement(16786855..16809005)
Genome browser
AA seq
753 aa
AA seq
DB search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NT seq
2262 nt
NT seq
+upstream
nt +downstream
nt
atggacctgtccctcccctctacatacctcctggcggtagcaatccatctgtgtctaata
cttggccatgcccacgggggggcatattatgggcacaagctgccgcaacacctaccactg
cagcatcagcccatgcaaccgatacctcacatgtccctgggaaacggttatggtaatggg
gatggccagcccccgcaacagtacccaggaaaagagatgccacagcacatgcaacatggc
aaagagataccatatgcaccacagtatgggcaggaacttccacagataccacccaataag
ggtaggggcaaaggtcagatgtaccccattaatgggaaaggccctgcaggaccaccacct
gaggatatgggactacagggtcctggccccgaggggccacaaggacctcagggccccccg
ggaccacagggtcccccagggatgcctggtcaagggatggctggcccccatggaaagcca
ggcccgccgggtccccaagggtatccggggatagggaaacctggattgcctggaatgcct
ggtaaacctggtggagctggccagccaggtccaaagggcgaccttggtcctggtggtgat
gtaggaccaatgggaattcctggggggccgggtcttccggggcccccagggttgccaggt
attggtaaaccagggggccagggacttccaggacagcctgggcctcgaggagaacctgga
cacaaaggtatacctggactccctggtcttcctggacctaagggagacaaagggattggc
ctgccaggattgccgggtttgaaaggacctggtggaccacctgggccttctggtcaaggg
ggcctgccagggattggtaaaccaggtttaaatggactaccaggaatgcctggggtacca
ggaaaaccaggcccaccaggggaaggaggatttgctgggccaccaggtgaagggggggaa
ccaggaccaccagggctaccagggattggtaaaccagggcaagacggattgccaggacaa
ccagggttccctggcaggaaaggggaaccaggcccaccaggtttaccgggaggaccaggc
ctacctggttatggcaagccaggatatcctggatcaaaaggagacaaaggacatggaggt
ttgcctggcgctcctggcctgaaaggagacaaaggacatggaggtctcccaggtcaagaa
ggccttccaggacccagtgggccaccaggcctgccaggtcccattggaccacctggaggt
cttggttttcctggtccaaagggggaaattggcaatggagggccaaagggttttccaggt
cctaaaggtgagccgggccctccggggcttccaggacagggtggatatcctggagatggt
ggccaaccagggccaagaggtttcccagggccaatgggtccaaagggggaccagggccac
aaagggttacctggtctcccaggagttcctggaatatctggtccaagaggagaaagtgga
atgtctggagaaaaaggtcaccaaggaccaaagggaatcccaggaaatgtaggtccaggt
ggcccacttggtcctcctggtcttcctggggcaaaaggtgagcttggtccaccaggaaaa
cctggctaccccggggaaggaaaacctggtgttccggggctcttaggccccccagggaaa
cctggcctcagtggaccgcctggtcagcctggacaaccaggactacctggccctcctggc
cgacctggaccccctgcccaactttctggtcttggcgaaatcctccctgaaatgggtcct
gctctagaaggtcttcaacaaggccattacaagaaaccaaagaatggaggggaaagaaac
gccctagagatgcctgcattcacagctaaactcacaaatccattccctcctgttggctca
cctgtcgtttttgacaagcttctatacaatggccatcaagactacaaccctgaaactggc
atcttcacctgtaccataccaggaatctattactttgcttaccacgtccactgcaaagga
gcgaatgtgtgggtggcgctagtcaagaacaatgagccagtgatgtacacatacgatgag
tacaaaaagggcatcctggaccaggcttcagggagtgctgtgctcccattacaccaagga
aacactgtgcatgtacagcttccatctgatcaggcagcaggactttatgctggtgaatat
gtccactcttcattctctggatatttattgtacccaatgtaa
DBGET
integrated database retrieval system
