Esox lucius (northern pike): 105028244
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Entry
105028244 CDS
T04894
Symbol
clstn3
Name
(RefSeq) calsyntenin-3 isoform X1
KO
K22661
calsyntenin 3
Organism
els
Esox lucius (northern pike)
Brite
KEGG Orthology (KO) [BR:
els00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
els04515
]
105028244 (clstn3)
Cell adhesion molecules [BR:
els04515
]
Cadherins
Cadherin related
105028244 (clstn3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLSTN_C
Cadherin
Laminin_G_2
Laminin_G_3
Motif
Other DBs
NCBI-GeneID:
105028244
NCBI-ProteinID:
XP_010899142
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All DBs
Position
LG20:39152510..39176283
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AA seq
961 aa
AA seq
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MDRMSFLSFLLLCLTSVANGNKANKHKPWIETEYQGIVMENDNTVLLNPPLFALDKDAPL
HYAGEICGFRVHNGPSGSGSVQFEAVVLDRSTGEGLVRSKEPLDCESQREHSFTIQAYDC
GEGPDGANSKKSHKATVHVRVNDVNEFSPVFVERRYEASVPEGRLFDRIVRVEALDADCS
PQYSQICFYDIITPNVPFAIDNDGNIKNTEPLDSKRQRVHTFWVTAFDCGKNRAQADAQV
VVTVKPSCKPGWIGWSKRVEYTPGSGSIPLFPSLHLETCEETVWNIQATVDLQTGHIGKG
CDRDSYSDRSVRRLCGAVRGEVDLLPPPSPAANWTSALPTLPSSDSSLVFSFNGSAHVAV
VPSSVAAAISGDHFTLQLWMRRGGATTQPPSNQARGTRREEETIICSTVKNGQSHDDSFS
HYYLSVHGCRLSLFYWPDVSAARPVKFLWKLEQVCDSEWHHLSLSVQFPSVTLYVDGVTF
DPALIHDNGAIPNPAPRQRMVIGACWETEEKQKDILNNTIPEGKDTGRYVAGYRGLLSGV
TVRPGSVEPHSVVECLYACREGLDFGDLETLGSGMKVHVNPSQSVLVLEGDDIESFNRAV
QQVTYRNSLRFATPGVRPLKLTTSLRCFNEESCLTLRQLEGYLVVLQPDAPQISLSGVGP
HLARPAPEFEGPRGVPLFPELRIVCSLSHAVNTAAQGMEGGALMSDAVAHTLDGCEVQPL
GEELNPEREELLVDMDALRERGLEIINTTAYIAITGAESISVYEDVLRSVRYRLAKGSAR
FERRFRLSCSEMNGRYTSNELTLEVNFLHSLDSLYHPSHLLASQQQFLHPSHHSGELSGH
TLPNPHRNSVVPGAATVIIMVCVGFLVVMVILGVFRIRSIHRRGEGARGAAKEGSGQWDD
SALTIIVNPMESYESRMGISVDTEGEGEEDEEVVESPDDASDDQRVIIIKKEGKEGNPRR
Y
NT seq
2886 nt
NT seq
+upstream
nt +downstream
nt
atggacagaatgagttttctctccttcctcctcctttgcttgacttcagttgccaatggc
aacaaagccaataaacacaagccatggatcgagacggagtaccagggcatcgtcatggag
aacgacaacacagttctgctcaacccgccgttgttcgccctggataaagacgccccgctc
cactacgcaggtgaaatatgtggcttccgcgttcacaatgggccctcgggatccggatcg
gtacagtttgaggctgtggttttggaccgctccacaggggagggcctagttcgctcaaag
gagccgctggactgtgaaagccaacgggagcatagcttcaccatccaagcctatgactgt
ggagagggtccagatggggccaacagcaagaagtcccacaaagccaccgttcatgtgcgt
gtgaacgacgtaaatgagttctccccagtgttcgtggagcgtcgctacgaggcgtctgta
ccagagggccgtctgttcgaccgcatcgtgcgtgtggaggccctcgacgccgactgctcc
ccgcagtacagccagatctgcttctacgacatcatcacccccaatgttccttttgccata
gataacgatggtaacattaagaacacagaaccgttggattcaaaacgccagcgcgtccac
accttctgggtgacagcattcgactgtggcaagaaccgcgcgcaggccgacgctcaggtg
gtggtcacggtcaagccgtcctgcaaacccggctggatcggctggtcgaagcgtgtggag
tatacccccgggtcaggcagcattcccctgtttcccagccttcacctggagacctgcgaa
gagaccgtgtggaacatccaggccaccgtagatctgcagacgggccatattggaaagggc
tgtgatagggacagctattcagaccgatcagtgcgcaggctgtgtggcgctgtgcgagga
gaggtagaccttctcccgcccccgtctcctgcagccaattggacgtcggccctgcccacc
cttccttcttccgattcgtccctggtattctccttcaatggctccgcccatgtcgccgtg
gtacccagctcagttgccgcagcgatatctggagaccattttacactccagctgtggatg
cgaaggggtggggccactacccaaccaccctccaatcaagccaggggaacgcgtagggag
gaggagactattatttgcagtaccgtcaagaatggtcagtctcatgacgactccttctcc
cactactatctctccgttcacggctgccgcctctctctcttctactggcccgatgtgtct
gctgcgcggcccgtgaaattcctctggaaactggagcaggtgtgtgacagcgagtggcat
cacctgtcccttagcgttcagttcccctcggtgacgctctacgtggacggcgtcaccttt
gacccggctctgatccacgacaatggagccattcccaaccctgccccacgacagcgcatg
gtcattggtgcctgctgggagacagaagagaagcagaaggacatccttaacaacaccatc
cccgaagggaaagacacagggaggtatgtggctggttaccgtggcctgttgtctggggtg
acggtgcgtcccggcagtgtggaacctcacagcgtggtggagtgtctctacgcctgcagg
gagggactggactttggggacctggagaccttgggctcgggcatgaaggtgcacgtgaac
cccagtcaatctgtgctggttctggagggggatgacattgagagcttcaatagggctgtg
cagcaggtcacctacaggaactccctacgcttcgccaccccaggagtcagaccgctcaaa
ctgactacctccctcaggtgtttcaatgaggagagctgcctcactctcagacagttggag
ggctacctggtggtccttcagcccgatgcccctcagatctccctgtccggcgtgggccct
cacctggcccgcccggcccctgaattcgagggcccccgcggcgtgccccttttcccggag
ctgaggatcgtgtgctccctgtctcacgccgttaatacggccgcgcagggcatggaggga
ggagctctgatgtcagacgccgtggcgcacactctggatggctgtgaggtccaacccctg
ggggaggagctgaacccagaaagggaggagcttctggtggacatggatgccctcagagaa
aggggtctggagatcatcaacaccaccgcgtacatcgcaatcacaggtgccgagtccatc
tctgtgtacgaggatgtccttcggtctgtccgttacaggctggccaaaggctcggcccgc
ttcgagaggcggttccgtttgtcctgctctgagatgaatgggaggtacaccagcaacgag
ctcacactggaggtgaatttcctgcattccttagacagtctgtatcacccgtctcacctc
ctggcctcccagcagcagttcctccacccgtctcatcactctggggaactaagcggacac
accctacccaacccccaccgcaattcagtggttccaggggcagccacggtcatcatcatg
gtgtgtgttggctttctggttgtcatggtgatcctgggagtgttccgaatccgttccatc
caccgacgtggagagggagctcggggagcggctaaggaggggagtggccagtgggacgac
tctgccctcaccatcatcgtcaaccccatggagtcctacgagtctcgtatgggcatctcg
gtcgacaccgaaggtgagggcgaggaggacgaggaagtggtggagtcgcccgatgatgca
agcgatgaccagcgagtcatcatcatcaaaaaggaggggaaggagggcaacccccgccgc
tactaa
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