Esox lucius (northern pike): 105028498
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Entry
105028498 CDS
T04894
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit isoform X1
KO
K07466
replication factor A1
Organism
els
Esox lucius (northern pike)
Pathway
els03030
DNA replication
els03420
Nucleotide excision repair
els03430
Mismatch repair
els03440
Homologous recombination
els03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
els00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
105028498
03420 Nucleotide excision repair
105028498
03430 Mismatch repair
105028498
03440 Homologous recombination
105028498
03460 Fanconi anemia pathway
105028498
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
els03000
]
105028498
03032 DNA replication proteins [BR:
els03032
]
105028498
03400 DNA repair and recombination proteins [BR:
els03400
]
105028498
Transcription factors [BR:
els03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
105028498
DNA replication proteins [BR:
els03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
105028498
DNA repair and recombination proteins [BR:
els03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
105028498
MMR (mismatch excision repair)
105028498
DSBR (double strand breaks repair)
HR (homologous recombination)
105028498
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
RADX
Motif
Other DBs
NCBI-GeneID:
105028498
NCBI-ProteinID:
XP_010899572
LinkDB
All DBs
Position
LG07:complement(8728583..8778248)
Genome browser
AA seq
623 aa
AA seq
DB search
MTVKLTEGAIEALTKGSEVTNPLLQILNIRYIEVGSGADRLRVMMSDGLHYMSSFLLATQ
LNSLYEENHLAPYCVCMLKKSFTNTLKDGRRVVVVLDLEVVRSAGEVGGKIGTPTPYVEG
QSVSPQNQNPGQSLPAAASSVSPQNQNPGQSLPAAASSSPHSRPRAGSSSTRGPAGKKAP
KAVPTTPGGSKANVVPIASLNPYNTKWTVRVRVTNKSSIRTWSNSRGEGKLFSFETVDES
GEIKVTAFNKEVDKFFPLLETGKVYYITRGKLKVANKQYSTLKNDYEMTLHSETSILPCT
DDQGLPMVQCDFVPISQLEHRDKDAIIDVIGVCRSVEDVSRLTTKTSREVSKRDIHLMDS
SAKMVTVTLWGEEAERFDGSCQPVVAVKGARVSDFRGRSLSALFSSTVMVNPDIPEAYRL
RGWFDKEGYALAGQSLTEMRSRGGGANTCWKTLSDVTTEQLGQGDKADYYTCVATVLFCR
KESCVYQACPMAHCQKKVVDQHNGLYRCEKCDKEFPNYKHRLILSANIADFGDNQWVTCF
QETAEIILCHDAESLGRLKDTNEDAFDEVFHKANFTTHIFRNRVKLETYNEETRVKTTVM
DVKPVNHREYSRRLISSIRKMAI
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgacagtaaaactcaccgagggagccattgaggccctgacaaaaggctctgaggtgacc
aatcctttgcttcagatactgaatatccgttatatcgaggtgggttctggcgcagaccgg
cttcgcgtaatgatgagtgatggcctgcactacatgtcctccttcctactggccacccag
ttgaacagtctgtatgaggagaaccacctggctccgtactgtgtgtgtatgctgaagaag
agtttcaccaacacactcaaggatggcagacgtgtggttgtagtgttggacctggaggtg
gttaggtctgcaggagaagttggaggaaagatcggaacacccactccctatgtagaagga
cagtccgtgagccctcagaaccagaaccctggccagagcctccctgctgctgcgtcctcc
gtgagccctcagaaccagaaccctggccagagcctccctgctgctgcgtccagttctcct
cacagccggcccagagcaggctcgtcttctaccagaggtcccgctgggaagaaggctcca
aaggctgtcccgactactcccggaggctccaaagctaatgtggttcccatcgcaagcctc
aacccctacaacaccaaatggactgtcagggtgcgggtcaccaataagagcagcattcgc
acctggagcaactcacgaggagagggcaagctcttctccttcgagactgtggatgagagt
ggtgagatcaaagtcacggccttcaacaaggaagtggacaagttcttccctctgctagag
acaggcaaggtgtactacatcactcgggggaagttaaaggtggccaacaagcagtactcc
accctgaagaatgactacgagatgacactacacagtgagacgtctatcttaccctgcaca
gacgatcagggcttacccatggtgcagtgcgactttgtacccatctctcagctggagcac
agggacaaggacgccatcatcgatgtgatcggtgtgtgtaggagtgtggaggatgtgagt
cgtttgaccactaagaccagtagagaagtgtctaagagagatattcacctgatggacagc
agcgccaagatggttacagtcaccctgtggggagaggaggcggagaggtttgatgggtca
tgccagccggtggtggctgtaaaaggggctcgtgtgtcagacttcaggggccggtccctc
tctgctctcttcagctcgacagtcatggtcaatcctgacataccagaggcttacaggctg
aggggatggtttgataaggagggttatgccctggccggccaatcattgactgagatgagg
tctaggggaggcggagccaacacctgctggaaaacactgagcgacgtcacaactgaacaa
ctggggcagggagataaggcagactactacacctgcgtggccaccgtgttgttctgtcgt
aaggagagctgcgtgtaccaggcctgtcccatggcacactgtcagaagaaggtggtggac
cagcacaatgggctgtaccgctgtgagaagtgtgacaaggagttccccaactacaaacac
cgtctaatactgtctgctaacatagctgactttggtgacaaccagtgggtgacgtgtttc
caggagacggcagaaataattctgtgtcatgacgcagagagtctgggccgacttaaagac
acaaatgaggatgcgtttgatgaggtcttccacaaggccaacttcaccacacatatattt
cgcaaccgagtcaagctagagacgtacaatgaggagacccgtgtgaagaccacagtgatg
gacgtgaaaccagtcaaccacagagaatacagcaggagactcatcagcagtatcaggaaa
atggccatctaa
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