Esox lucius (northern pike): 105028630
Help
Entry
105028630 CDS
T04894
Symbol
ssrp1
Name
(RefSeq) FACT complex subunit SSRP1 isoform X1
KO
K09272
FACT complex subunit SSRP1/POB3
Organism
els
Esox lucius (northern pike)
Brite
KEGG Orthology (KO) [BR:
els00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
els03000
]
105028630 (ssrp1)
03036 Chromosome and associated proteins [BR:
els03036
]
105028630 (ssrp1)
Transcription factors [BR:
els03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG2-related
105028630 (ssrp1)
Chromosome and associated proteins [BR:
els03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
105028630 (ssrp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH1_SSRP1-like
Rttp106-like_middle
SSrecog
POB3_N
HMG_box
HMG_box_2
HMG_WDHD1
SSRP1_C
YABBY
Motif
Other DBs
NCBI-GeneID:
105028630
NCBI-ProteinID:
XP_010899804
UniProt:
A0AAY5L3T5
LinkDB
All DBs
Position
LG04:complement(4402249..4411876)
Genome browser
AA seq
709 aa
AA seq
DB search
MGDTLEFNEIYQESKGSWNDGRLRFSKQNVVYKSNKTGKVDSISAAELSQATWRRVCLGH
GIKLATSAGHVYKYDGFRDTDYEKISEFFKANYKVELAEKDMCVKGWNWGTAKFSGPLLS
FDVNDSSVFEIPLASVSQCATGKNEVTLEFHQNDDAEVSLMEVRFYVPPGTADEGADPVE
AFAQNVLSKADVIQATGDAVCVFKELQCLTPRGRYDILIYPAFLHLHGKTFDYKIPYTTV
LRLFLLPHKDQRQMFFVISLDPPIKQGQTRYHFLILLFSKEEELRLTLNMNEEEVEKRYE
GKLSKNMSGSLYEMVSRVMKALVNRKITVPGNFQGHSGAQCITCSYKAQSGLLYPLERGF
IYVHKPPVHLRFEEISCVNFARGTTTTRSFDFEIETKQGNQFTFSSIEREEYGKLFDFVN
AKKLNIKNRGFKEKKGMKGKNNEYSDSDDDQHDAYLERMKAEGKIREEGDGSDDSEGETD
ESFNPGEESDVAEEYDSNASESDSGSGGGDSEDEGKKKPAKKVKVVKERKPRKEKKQKDA
NAPKRPMSAYMLWLNSSRERIKAENPGISITEISKKAGEMWKQIGKEDKEEWDGKAEEAK
RNYERAMKEYRESGGVSSAPAKKDNKKKPGGKKEDKKRKSSGGEKEKERGGGNDSFKSRE
FISSEESSSDGERKKAKKPKGGKPKPKSKESDDEEEAMTTPATSEEDSD
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atgggagacactctcgagttcaacgagatctaccaggagtctaaagggtcctggaacgac
ggccggctgcggttcagtaagcagaacgtggtctacaaaagcaacaagactgggaaggtg
gacagcatctcggccgcggagctgtcccaggccacctggagacgcgtgtgcctggggcac
ggcatcaaactggccaccagcgccgggcatgtctacaaatacgacggcttcagagacacg
gactatgagaagatctcagaatttttcaaggctaactacaaggtggagctggcagagaag
gacatgtgtgtaaaggggtggaactggggaactgctaaattctctggtccgctgttgtcg
ttcgacgtgaatgacagctcagtgttcgagatccccctggccagcgtgtcccagtgcgcc
actgggaagaacgaggtgaccctggagttccaccagaacgacgacgccgaggtctctctc
atggaggtccgcttctacgtcccacctggcaccgctgacgagggggctgatcccgtggag
gcttttgcccagaacgtgctgtcgaaggcggatgtgatccaggctacaggagatgccgtc
tgtgtcttcaaggagctgcagtgcctgactcccagaggaaggtatgatatcctgatctac
ccagccttcctccacctccatggaaagacgtttgactacaagatcccctacaccacggtg
ctgcgcctcttcctgctgccacacaaggaccagaggcagatgttcttcgtgatcagcctg
gacccgcccatcaagcaaggccagactcgttatcacttcctcatcctgctgttctccaag
gaggaggagcttcgtctcaccctgaacatgaatgaggaggaggtggagaagcgctacgag
gggaagctcagtaagaacatgtctggttctctgtatgagatggtcagcagggtgatgaag
gctttggtcaacaggaagatcactgtgcccggaaacttccagggtcattcaggggcccag
tgcattacgtgctcctacaaggcccagtcaggccttctctaccctctggagaggggcttc
atctacgtccacaagcccccagtgcacctccgcttcgaggagatctcctgtgtcaacttc
gccagagggaccaccaccacgcgctccttcgacttcgagatcgagaccaagcagggaaac
cagttcaccttcagcagcattgagagggaggagtatgggaagctgtttgactttgtcaac
gccaagaagctcaacattaagaacaggggattcaaagagaaaaagggcatgaaggggaag
aacaatgagtacagtgactcggatgacgaccaacacgacgcgtacttggagcggatgaag
gcagagggcaagataagggaggagggagacggcagcgacgactcggaaggagagaccgac
gagtctttcaaccctggagaggagagcgatgtcgctgaggagtacgacagcaacgcgtca
gagagcgacagcggcagtggggggggtgacagcgaggacgagggaaagaagaaacctgca
aagaaagtcaaagtggtgaaggagaggaagccacgcaaagagaaaaagcagaaggatgcc
aacgcccccaagagaccaatgagtgcttacatgctgtggctcaactccagccgcgagcgc
atcaaggcggagaacccaggaatctccatcacagagatctccaagaaggcaggggagatg
tggaaacagatagggaaggaggacaaggaggaatgggacggcaaggcagaggaggccaag
aggaactacgagagagccatgaaggagtaccgagagagtgggggagtatcctccgcgccc
gccaagaaggacaataagaagaagccaggaggcaagaaggaggacaagaagaggaagtcc
agtggaggggagaaggagaaggaacgaggaggggggaacgacagttttaagagccgagag
tttatctccagcgaagagagttcgtcggacggagaacggaagaaggccaagaaacccaag
ggaggcaaacccaaacccaagagcaaggagtctgatgatgaagaggaagccatgaccacg
cccgctacatctgaggaggactctgattga
DBGET
integrated database retrieval system
