Esox lucius (northern pike): 105028880
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Entry
105028880 CDS
T04894
Name
(RefSeq) E3 ubiquitin-protein ligase RNF38
KO
K19041
E3 ubiquitin-protein ligase RNF38/44 [EC:
2.3.2.27
]
Organism
els
Esox lucius (northern pike)
Brite
KEGG Orthology (KO) [BR:
els00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
els04121
]
105028880
Enzymes [BR:
els01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
105028880
Ubiquitin system [BR:
els04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
105028880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-rbx1
zf-C3HC4
zf-RING_5
zf-C3HC4_3
zf-ANAPC11
zf-RING_UBOX
VPS18_RING_C
Motif
Other DBs
NCBI-GeneID:
105028880
NCBI-ProteinID:
XP_012989068
UniProt:
A0A3P8ZDK2
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All DBs
Position
LG04:complement(4281880..4291087)
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AA seq
611 aa
AA seq
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MDPPRTRSRSRSGFFHYGMNGGGSGNNANNNVNMMNASGGIGVSYPAQNNPGWVSHGARG
SYAENQHAPGNYLSSGSQRHASHGAHRHPGTGGVLHFHPDNVCTDDRDKMEDSPSPKRQR
LSQQSMLDLSSAPPPTPASPIRPWEMSHTPTNWATPPLSRRPHPHFLPERCHTPVRNRRS
PPMRRQRGRRERLTRHPHHHYHHHHHNPHHHHPHPHHGLSAGPQDENYRHAAPPQGYPYN
QQPPRGPEERPYHPPNLSPRPLHHPPNLSPRLMHPHPPQQPSGVVLDLHDQGSAQVSYSV
SPPGGAPGLPPRSAPQQLPTCSVVFSGQHYPVCSVPPQVLQTCSVQHLPMPYPFPSLLSS
DPTFLLTPPHLSHPPPHLSHHPPHLAQPGQFGPYPTQQARSPLQRIENDVELLGEHLSLG
AGLHYPPATHPGLPPHSTQLHFLSHDPLPQEFFGVSYPNFMPRRIPGRRYRSQQPLPPSP
YHPSFLPYFLSMLPVQPTGPAISLELDVDDGEVENYEALLNLAERLGEAKLRGLTKGDIE
QLPSYRFNPNNHQSEQTLCVVCMSDFESRQLLRVLPCSHEFHGKCVDKWLRANRTCPICR
ADASEIQRDSE
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atggaccccccaaggactcggtcgcggtcgcggtcaggtttctttcattatggcatgaac
ggtggtggcagcggcaataacgcgaacaacaacgtgaacatgatgaatgctagcgggggg
atcggggtcagctacccagcacagaacaaccctggctgggtttcgcatggagcgcgcggc
agctacgcggagaaccagcacgccccggggaactacctgtccagcggatctcaacgccac
gcttcacacggagctcacagacaccccggcactggaggtgtcctccacttccaccctgat
aatgtctgcactgatgacagggataagatggaggacagccctagccccaagcgccagcgt
ctttcccagcagtcgatgttagacctaagctccgcccctccccccaccccagcctctccc
attcgtccctgggagatgtcccacactcccactaactgggccacaccgccactcagtcgc
aggccacacccccacttcctgccggagcgatgccacactcctgttcgcaaccggcgcagt
cctccaatgagacgccagcgaggccgccgggaacgtctcacccgccacccccatcaccac
taccaccaccaccaccacaaccctcaccatcaccatcctcacccccaccatggcctctca
gccgggcctcaggacgagaactaccgccacgccgccccgccccagggctacccctataac
cagcaacccccccgggggccggaggagcgtccctaccaccccccgaacctgtccccccgg
cccctccaccaccctcccaacctctctcccaggctgatgcacccccacccccctcagcag
ccgagtggtgtggtgctggacctccatgaccagggttcggctcaggtgtcgtactccgtc
tctcccccgggtggcgcccccgggctgcccccccgctccgccccccagcagctgccaacg
tgctctgtggtcttcagtgggcagcactacccagtctgcagtgtccccccacaggttcta
cagacatgctctgttcaacacctccccatgccctaccccttcccgtccctgttgtccagt
gaccccacctttctcctgaccccccctcacctctcccatcccccccctcacctctcccac
cacccccctcacctcgcccagcctgggcagtttggaccctacccgacacaacaggccaga
tcgcctttacagaggatagagaatgacgtggagctgttgggggagcacctgtcattaggg
gcggggcttcattaccccccggccacccatcccggcctgcctccccactccacacagctc
cacttcctctcccatgatcctttgccgcaggagttctttggagtgtcgtatccaaacttc
atgccacggcgtatcccagggcgacgctatcgatcccagcaaccactgccaccgtcgcct
tatcatcccagcttcctgccttacttcctctcaatgctgccggtgcagcccactggcccg
gccatcagcctggagctggacgtagatgacggggaggtggagaactatgaggccctcctt
aatctggccgagcgcttgggagaagccaaactcagaggactcaccaagggggacatagag
cagctgccttcctataggttcaatcccaacaaccaccaatcagaacagactctgtgtgtc
gtttgtatgagcgactttgagtctcgccagctgctacgtgttctcccctgcagtcatgag
ttccacgggaagtgtgttgataagtggctcagggctaacaggacatgtcccatctgcagg
gctgacgcctctgagatacagagagactcagagtga
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