Esox lucius (northern pike): 105029231
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Entry
105029231 CDS
T04894
Name
(RefSeq) nuclear receptor ROR-alpha A isoform X1
KO
K08532
RAR-related orphan receptor alpha
Organism
els
Esox lucius (northern pike)
Brite
KEGG Orthology (KO) [BR:
els00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
els03000
]
105029231
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
els03310
]
105029231
Transcription factors [BR:
els03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
105029231
Nuclear receptors [BR:
els03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
105029231
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
105029231
NCBI-ProteinID:
XP_028971231
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Position
LG20:16497473..16531262
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AA seq
497 aa
AA seq
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MEYEEPESPDPITTEEPVKKGGSVSKKTHLTQIEVIPCKICGDKSSGVHYGVITCEGCKG
FFRRSQLPSVSYSCSRQSNCPIDRASRNRCQSCRLQKCVAQGMSRDAVKFGRMSKRQRDS
LCAEVERHRQQQRLEGEALPTLHYPSKARRDRSPHLIQAPASAYSFPGEAKLASCPTDVL
PYLVGSQGESQASGLAYRGSCVSPGSGHSDERGFDSRQPSPEQMIGMGIRPYDPEDTYCP
YPSTMLHMEELLSSITRSHRDTSQFRMEALHALKWKLFSREETHAYQCKTVDEMWQHCAV
RLTEAVQYVVEFAKRIPGFRGLGQNDQINLLKTGSMEVVLVRMSRCFNTENSTVFFDGKF
AGTDLFKSLGCGDLVVAVFDFAHSLCALSLTEQQMALFSALVLIDPDRPCLEDRGRVYRL
RKDLELALNHMLHRDNQESLLHKLYQKVSVLRSLCSLHVEKLHWFSQLYPLTVHSLFPPL
YKELFAPDSDQTSVATL
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atggaatatgaggagccggaatcacccgaccccatcacgactgaggaacccgtaaaaaaa
ggaggctctgtatccaagaagactcacttaactcaaatcgaggtgatcccatgtaagatt
tgtggcgataaatcatcaggagttcactatggagtcatcacctgtgagggctgcaagggg
tttttccggagaagccagctgccctccgtgtcctactcctgttccagacagagtaactgt
cccattgaccgagccagccgcaaccgctgtcagagctgtcggctacagaagtgcgtggcc
cagggcatgagcagggacgcggtgaagtttggccggatgtcaaagcgccagcgcgattct
ctgtgtgctgaggtggagagacaccgacagcagcagcgtctcgagggagaggccctgccc
accctgcactaccccagcaaggcacgacgtgaccggtcaccccacctgatccaagccccg
gcttcggcctactctttccctggagaggccaagctggcatcctgcccgacggatgtgctc
ccctaccttgtgggttcccaaggcgagtcccaggcttcgggtctggcctaccgaggctcc
tgtgtgtctcctggcagcggacactctgatgaaagaggattcgactcccgccagccgtct
cctgaacagatgattgggatgggtattcgaccctatgacccggaagacacctactgccca
tacccctccaccatgcttcacatggaggagttgttgagcagtatcacgcgctcccaccgg
gacaccagccagttccggatggaggcgctgcatgctctgaaatggaagttgttcagccgg
gaggagacccatgcttaccagtgcaagacagtggatgagatgtggcagcactgtgctgtc
cggctcactgaggcagtacagtacgtggtggagtttgccaaacgcatccctgggttccgt
gggcttggacagaatgaccagatcaacctgctcaagactggttcaatggaggtggttctg
gtccgcatgagtaggtgtttcaacacagagaacagcacagtcttcttcgacgggaagttt
gccggaactgacctcttcaaatctttgggctgtggtgatctcgtggtggcggtgtttgac
tttgcgcacagtctgtgtgctctcagtctgactgagcagcagatggccctcttcagtgca
ctggtgctcatcgatccagatcgcccctgtcttgaggatagaggcagagtgtatagactg
aggaaagacttggagttagccctcaatcacatgctacacagagacaaccaggagagtctt
ttgcacaagctctaccagaaagtgtcagtcttgcgctctctatgcagtctgcatgtggag
aagctacactggttcagccaactctaccctctcaccgtccactcactctttcctccactt
tacaaggagctgttcgcccctgactcagaccagacatctgtggccacactctga
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