Esox lucius (northern pike): 105029237
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Entry
105029237 CDS
T04894
Symbol
nbn
Name
(RefSeq) nibrin isoform X1
KO
K10867
nibrin
Organism
els
Esox lucius (northern pike)
Pathway
els03440
Homologous recombination
els04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
els00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
105029237 (nbn)
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
105029237 (nbn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
els03032
]
105029237 (nbn)
03400 DNA repair and recombination proteins [BR:
els03400
]
105029237 (nbn)
DNA replication proteins [BR:
els03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
105029237 (nbn)
DNA repair and recombination proteins [BR:
els03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
105029237 (nbn)
BRCA1-C complex
105029237 (nbn)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Nbs1_C
NIBRIN_BRCT_II
FHA
Yop-YscD_cpl
RTT107_BRCT_5
BRCT
PTCB-BRCT
Motif
Other DBs
NCBI-GeneID:
105029237
NCBI-ProteinID:
XP_010900790
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All DBs
Position
LG20:complement(16439620..16457374)
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AA seq
841 aa
AA seq
DB search
MWILNPLESGGVTHYLLPGKEYVVGRKNCQVLLPNDQSISRVHAHFTATDQALTLKDSSK
YGTFVNEQRLSGDTPHTLSTGDRVTFGVFHSKFSVQSVAMVVCSSCVDNEGKVSLSKALK
LLGGQLVTTWTRDCTHLVMPTVKVTIKTICALLCCRPIVKQEFFTELSRALQQNQPLPKA
ESFLPEIDEPSLNKDEVDLTEKPERKQLFSGKTFLFLSAKQQKRLSLALSCGGGRCQLLE
EGSLPLSLLESPASCVIELAAGNPQAALPSSTKNWADSVGRILQGKGLRFIAESEIGLAA
IYVSCNKFCNPSNVLVDSESMRRTPIIPSATLSQNPPVNETMLPTSSQNITAYAMNTEPS
QGISGLDLAGVSAVGETPERDQSRTASHLDRPKPCSTRELTETCVVAETMMTSFSAVDSA
GDGGTGKKNAETQHAGGGKGDAIAKFLVAAPRTDGEVQTKSPQKRSSYKPISQTDSPQKQ
STLTSFFQPVSKKRPREGEQSTSVQSGAKLSRTEEGKTKMTEPLCTETHNVTQNRSPSNC
PTVQTPACSFQSQQRSGAGVFSGQTPALTKGVQSRKRKEMEENTKGENILEIEMNELESI
MSEDMDESDKPMSDSQGQQSSSTNKKQRVDLLEPSTANHRPSLDPEEGSSSNKRPKAKPV
AEFKEEEVSFVEAEPVNGVASGGLEELTFDTKPTKPFKQEATVSEDKKLPSRLLVVEFKS
LTVATPARAKTGPTEAHGNVNRKDFKRFRKVPVPGALGLPKIIGGSDLLAHSRGKNSELE
EWLRDAAEDDRQSKKEETVGDDLFRYGNKASTWWTANAKTIKRNRQGLNYFRWTTGVYRT
V
NT seq
2526 nt
NT seq
+upstream
nt +downstream
nt
atgtggatattgaatcccttagaatccggaggtgtgacacactacctcctgccaggtaag
gagtatgtggtggggcgtaaaaactgccaggttctcctgcccaatgaccaatccatcagt
cgagtgcatgcacatttcactgctacagaccaggccctgaccctgaaagacagctcaaag
tatgggacgtttgttaacgagcagcgtctgtcaggggacacccctcacactctgagtaca
ggagacagagtgacatttggggtgttccacagcaagttcagtgttcagagtgttgccatg
gtggtgtgttcatcctgtgtggataatgaaggaaaagtctctctgtctaaagccctgaag
cttctgggtggccagctggtcaccacatggacacgggactgcactcacctggtcatgccc
actgttaaagttaccatcaagactatctgtgcattactgtgttgtcgacccatagtcaaa
caggagttctttacagaactcagtagagcactgcagcagaatcaaccccttcctaaagct
gaaagtttcttgccagagattgatgagcccagtctaaataaggatgaagtggatctgacc
gagaagcccgagcgtaaacaactcttctccggcaagaccttcctgtttctcagtgccaaa
cagcaaaagcggctgagtttagcactgagttgtggaggtgggaggtgccagctccttgag
gaggggtctctgccgttgtcactgctggagtcaccggcaagctgtgtgattgaattggca
gcaggcaacccccaagctgcgttgccttcctcaactaagaactgggcagactctgtgggc
aggattttacagggtaaaggtcttcgattcatcgcagagtctgagatcggattggctgcc
atttatgtcagctgtaacaagttctgcaatccctccaatgtgctggttgactcagaatcc
atgagaaggacacccattatccccagtgccacgctatcccagaatccaccagtaaatgag
actatgctgcccacatcttctcagaacatcacagcttacgccatgaacactgagccgtca
cagggcatcagtgggctggacttggctggggtgagtgcagttggagagacccctgaaagg
gaccaaagccgcaccgcttctcatcttgaccgacccaaaccctgctcaaccagagagctg
actgagacttgcgtagtggctgagactatgatgacatcattcagtgccgtagatagtgct
ggtgatggtggcactggcaaaaagaatgcagagacacaacatgcaggtggaggtaaaggt
gacgcgatcgccaaattcctagtcgctgccccgcggaccgatggggaggtacaaacaaag
tccccacagaaacgctcttcctacaaaccgatctcacagacagattccccccagaaacag
tctactctcactagtttcttccagcctgtcagcaagaaaagacctagggagggtgagcag
tccacttctgtccaatcaggggccaagctctccaggaccgaagaaggcaaaacaaagatg
acagaaccattgtgtacagaaacccacaacgtcacacagaaccgtagtccctcaaactgt
cctactgtgcaaactcccgcttgcagtttccagagccaacagagatcaggagcaggtgtg
ttttcgggacaaactcctgctctgacaaagggggtccagtccagaaaaaggaaggagatg
gaagagaacacaaaaggggaaaatattttagagattgagatgaacgaacttgagtccatc
atgtctgaggatatggatgaatcagacaagcccatgtcagatagccaaggccaacaatcg
agttcaaccaataagaaacagcgggttgatttactggaaccaagcacagccaatcatagg
ccaagcttggatccagaggagggctcatcttccaataaacgaccaaaagcgaagcctgta
gctgagttcaaggaggaagaggtgtctttcgttgaggcagaaccagttaacggcgtggcc
tctggaggtctggaagaactgacgtttgataccaaacccaccaaaccatttaaacaggag
gccacagtttcagaggacaagaaacttcccagtagactgctagtggttgaattcaagtcc
ctcaccgtggcaactccagcaagagccaaaacaggccccacagaggcacacgggaatgtc
aacaggaaggacttcaaacgcttccgcaaggtcccagtccccggagccctgggtttgccc
aaaatcatcggaggatcagacctgctggctcacagccggggcaagaactctgagctggag
gagtggctgagagacgcagcagaggatgaccgtcagagcaagaaggaggagaccgtgggg
gatgaccttttcaggtacggcaacaaggcatcaacatggtggaccgcaaacgccaaaaca
atcaaacgaaaccgacaggggttaaactatttcagatggactaccggagtctatcggacg
gtgtaa
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