Esox lucius (northern pike): 105029292
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Entry
105029292 CDS
T04894
Name
(RefSeq) LOW QUALITY PROTEIN: ATP-binding cassette sub-family A member 1
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
els
Esox lucius (northern pike)
Pathway
els02010
ABC transporters
els04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
els00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
105029292
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
105029292
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
els02000
]
105029292
Transporters [BR:
els02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
105029292
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC2_membrane_3
ABC_tran
R1_ABCA1
AAA_21
AAA_23
Motif
Other DBs
NCBI-GeneID:
105029292
NCBI-ProteinID:
XP_028977233
LinkDB
All DBs
Position
LG08:3489576..3520269
Genome browser
AA seq
2237 aa
AA seq
DB search
MGIGTQLLLLLWKNITYRRRNKIQLIIELVWPLFLFLILIAVRRSHPPYKQSQCHFPNKA
LPSAGTVPWVQGIICNINNPCFQGPTPGETPGRVGNFDNSILSRLLVDAQSILSYSGNQT
AFSGFQDLLDTIQRLGERPGAWPNLPVIEYLRANQTFSNFLLTNGSLSPSALDQLLRARL
NFQVVSLAGTGSMLKDIVCNATVLSRFLTVERGDSMEDLQNQLCAIPAGTLLQAEQLFLS
QLDFSKFFTRERLLANAGDLRVISQSVTSVSKELAVLMDDLSSLSSFAELNAELRLLSPE
NRSAPPQESFRAFSRIMCGHPEVGGERIPSLNWYEDNDLKSFLGKNGTEDTDMDKDNVTS
PYCKSLVRSLESNPLSRIVWRGIKPLFTGKLLYTPDTPAVRDVMKEVNKTFQDLQILEDL
NGAWAELGPRVKTYMESSVEIQLLQDLLRRPEVAVLVNLQLENTSWTAKRIAHFLSTPNG
PRKEGAPPTWLDVYSDFNNSITTLAQVTQCFSLNKLEGVATEGQMIDRALELLEQREFWA
GIVFLLPNTSSSSLPPHVTYKIRMDIDDVARTNKIKDRFWDPGPAADPFSDMRYIRGGFV
YVQDLVERAVARVLSGVQPTTGVYIQQMPYPCYVDDVFLRVLNRSLPLFMTLAWIYSVAM
IIKGMVYEKEARLKETMRIMGLGTGQLWFSWFLSSLVPFLISAWLLIALLKWGDILPYSN
PAVVFFFLTAFATATIMQCFLISTFFSRANLAAACGGLIYFALYLPYVLCVAWRDHLTTS
HRVLASLFSPVAFGFGCEYFSQFEEQGVGIQWFNLRSSPREGDTYSFTTSIVMLYVDAFV
YAVAAWYIEAVFPGQYGVPRPWNFVFSLNFWGGIPLEAGMPIPPAPTGQEDDRIEAEPTH
LVLGVAIRNLVKIYKKGAKLAVNHLNLKFYEGQITSFLGHNGAGKTTTLSILTGLFPPTA
GTVYIKGMDIRYDMDTIRKTLGVCPQHNVLFDILTVEEHVWFYGRLKGLSSEEVKKELDV
LLQDVGLLHKRHEQTKNLSGGMQRKLSVAIAFVGGSKVVILDEPTAGVDPYSRRGIWDLL
LKYRKDRTIILSTHYMGEADLLGDRIAIISQGKLCCCGSPLFLKARLGTGYYLTVVKKEG
LEGRTPASASATKLPAVAKDSDSSMSDDTGLGSDISGPDLAALLALAQRHVPGARLVEDV
GREAVINLPHKSAEDSSLAVFLNELDHRKADLGITSYGLSDTTLEEIFLRVAEETGVDMD
SEGSLGQPHNPQHQGEGPSTPGEPPEHPGRKHKTEPQETDLLSGEGHGGVPLTGWGLTWQ
QLRALFIKRWLYAIRSRRGLFAQIVLPAVXVLIALLFSLIVPPFGKYPSLQLQPWMYGEQ
YTFFSNDAPEDQVIQNLLEALLQRPGFGTKCMENSTDPQCLQEKQGTFMRPQVPHSEWKI
FNQGNWTADRPSPDCACSSEEVRRMLPECPAGAGGIPPPQIKRSTGDILQNLTGRNISDY
LVKTYPQTMKKSLTSATKKWINEFRYGGFSLGARGSQSVPQTSRMEDVVMTIRSRYNVAQ
NSSLDQLLGRLPEFLSGLNSKNNVKVWYNNKGWHAMASFVNVMNNGLLRASLPPGPERLR
HGITAYNHPLNLTKEQLTEMAMMTTSVDVLVSICVMFAMSFVPASFVLFLIEERVSKAKH
LQFVSGVRPILYWLANFTWDMLNYTVPAVMVVLIFIGFQQQSYVSESNLPALVLLLLLYG
WSVTPLMYPASFLFSVPSTAYVVLTSVNLFIGINGSIATFVLELFVDPHLNGINKILKKV
FLIFPHFCLGRGLIDMAKNQAMSDAFRDWVXHNFLRQADLDPLKWDFVGKNLFAMAVEGV
VFFLFTILLQYKFFINCRPCSEPGLLPLGPEDEDIAKERREAKERASPADILTMIDLSKR
FLCRCTKRRKKPAVDRLCLGIPRGECFGLLGVNGAGKTSTFFGMLTGDTTVSYGEAFLSH
SQVRPVRSSPSSQSTETXLMYTNDGYCPQFDAICELXRAGQHLEFYARIRGVPEESVSKV
ARWGVRTLGLTQYAEREAGAYSGGNKRKLSTAIALIGAPPVLFLDEPTTGMDPXAKRFLW
NCILTVIKDGRAVVLTSHSMEECEALCTRLAIMVNGRFQCLGSVQHIKNRFGDGYTIVLR
LXGFHPPNTPENPCPVDSYIKSSFPGIELMERHQNVFCSTTAHRACSLARVFDVLSSNHE
ELGITDYSVSQTTLDQV
NT seq
6714 nt
NT seq
+upstream
nt +downstream
nt
atggggattgggactcagctcttgcttcttctctggaagaacatcacttaccgcaggagg
aacaagatccagttgattattgaactggtctggcctctgtttctgttcctcatcctcatc
gcagttcgtcgctctcatcctccttacaagcagagccaatgtcatttccccaacaaggca
cttccctcagcaggcactgtaccttgggttcaggggattatctgcaatatcaacaacccc
tgcttccaaggccccactccgggggaaaccccagggcgggtgggcaactttgacaactcc
atactctctcgactcctagtggacgcccagtcaatcctgtcctacagtggcaaccagact
gccttctccggcttccaggaccttcttgatacaatacagagacttggagagagaccaggc
gcatggccaaatcttcctgtgattgaatacctcagggccaatcagacattctccaacttc
ctcttgaccaatggcagcctgtctccctctgcgctagaccagctgttgagggcccgtctg
aactttcaggtggtttctctggcaggcactgggagtatgctgaaggacattgtgtgcaat
gccactgtgctgagccggttcctcaccgtggaacgaggcgactctatggaggatctacag
aaccagctctgtgccatcccggccggcaccctgctccaagcagagcagctcttcctctcc
cagctggacttcagcaagttcttcacgagagaaagactcctggccaacgccggtgacctc
cgagtcatcagtcagtcggtcacctccgtgtccaaagagttggccgtgctcatggatgat
ctgtcgtctctctccagcttcgcagagctgaacgctgagctgcgcctgctctcaccggag
aaccgctcggcgccgcctcaggagagcttcagggccttctcacggatcatgtgtgggcac
cctgaggtgggcggggagaggatcccatcgttgaactggtacgaggacaacgaccttaaa
tccttcctgggcaagaacgggacggaggacaccgacatggacaaggacaacgtcaccagc
ccgtactgtaaatccttggtccggagcctggagtccaaccccctgtcacgcatcgtgtgg
cgagggatcaagcccctgttcacgggcaagctgctctacacccctgacacccccgccgta
cgcgacgtcatgaaggaggtgaacaagaccttccaggacctgcagatcttagaggacctg
aacggtgcctgggcggagctgggacctcgtgtcaagacctacatggagagcagtgtggag
atacagctgctgcaggatctgcttaggcgtccagaggtggctgtgttggtcaacctgcag
ctggagaacacttcctggacggccaagcgcattgcccacttcctgtccacgcccaacgga
cctaggaaagaaggagcacccccgacctggctggatgtgtacagcgacttcaacaacagc
atcacaaccctggcccaagtcacccagtgcttctccttgaacaagctggagggagtcgcc
actgagggacagatgattgaccgggctttggagctgctggagcagagggagttctgggct
gggatcgtcttcctcctgcccaacacctcctcgtctagcctgcctccgcacgtcacctac
aagatacgcatggacattgacgatgtggctcgcaccaacaagatcaaggacaggttctgg
gacccgggcccggcagcggaccccttcagtgacatgcgctacatccggggcggcttcgta
tacgtccaggacctggtggagcgggccgtagcccgtgtgctgagcggcgtccagccgacc
accggcgtctacatacagcagatgccctacccctgctacgtggatgacgtgttcctgcgt
gtgctgaatcgctcgctgcccctgttcatgacgctggcgtggatctattcggtggccatg
atcatcaaaggcatggtgtacgagaaggaggcccggctcaaggagaccatgaggatcatg
ggtctgggcacgggccagctgtggttcagctggttcctcagcagtctggtgcccttcctc
atcagcgcctggctcctcatcgctctgctcaagtggggggacatcctgccctacagcaac
ccagcggtggtcttctttttccttacggccttcgcaacagccaccatcatgcagtgtttc
ctcatcagcaccttcttctcccgggctaacctggcggccgcctgcggaggcctcatctac
tttgccctctacctgccctatgtgttgtgtgtggcctggagagaccacctcactaccagt
caccgcgtcttagccagcctgttctctcctgtggcctttggctttggctgtgagtatttc
tcccagtttgaggagcaaggagttggtatccagtggttcaacctgcgctccagtcccagg
gagggagacacctacagtttcaccacgtctatagttatgctgtacgtcgatgcttttgtc
tatgctgtggccgcctggtacattgaagccgtattcccagggcagtatggggtacccagg
ccgtggaattttgtgttctctttaaacttctggggaggaatccctctagaagccggcatg
cccattcctcctgctcccacaggacaggaagatgatcgtattgaagccgaacccactcat
ctcgtactgggcgtggccatccgcaacctcgtcaaaatctacaagaaaggcgcaaagctg
gcagtcaaccacctcaacctaaagttctacgaaggccagatcacttcttttctgggacac
aacggagctggcaaaaccactaccttgtctatcctgacgggtctgttcccccccacggct
ggaactgtgtacattaagggcatggacatccgctatgacatggacaccatcaggaagacc
ctgggagtgtgtcctcagcacaatgtgctctttgacattttgaccgtggaggaacacgtg
tggttctatggtcgtctgaagggcctgtcgagcgaggaggtgaagaaggagctggacgtg
ctcctccaggatgtcggtctgctgcacaaacgacatgagcagaccaagaacctgtctggt
ggcatgcagaggaagttgtccgtggccatagcgtttgtgggcggttctaaggtggtgatc
ctggacgagcccacagccggggtggacccctactcccgtcggggcatctgggacctgctg
ctcaagtaccgcaaagatcgcaccatcatcctctccacccactacatgggtgaggctgac
ctcctgggagatcgcatcgccatcatctcccaggggaagctgtgctgctgtggctcgccc
ctcttcctcaaggcccggctggggacgggatactacctcaccgtggtcaagaaggagggt
ctggagggtcggacccccgctagtgccagcgccaccaagctccccgctgtcgccaaggac
agtgactcctccatgagtgacgacacaggactgggcagtgacatcagcggcccagacctg
gccgctttgttggccctggcgcagcgccatgttcccggggcgcggctggtggaggatgtt
gggcgcgaggcagtcatcaacctgccccacaagtcggcagaggacagcagcctggccgtc
ttcctcaacgagctggaccacaggaaggctgatctgggcatcaccagctacggcttgtca
gacaccacactggaggagatctttctgagagtggctgaggagacaggggtagacatggac
tcagaggggagcctgggacagcctcacaatccccagcatcagggtgaaggaccgagcaca
cctggagagccacctgagcatccaggaaggaaacacaagacagaacctcaggagacagat
ctgctgagtggggaaggccatggtggagtccctctgactggatggggcctgacctggcag
cagctccgggcactcttcatcaagaggtggctgtacgccatccgcagtcgcaggggctta
ttcgcccagattgtgctgcctgccgtgnttgtgttgatcgctctgctcttcagcctcatc
gtccctccgtttgggaagtacccctccctccagctgcagccctggatgtacggcgaacag
tacaccttcttcagtaatgacgcgcctgaggaccaagtcatccagaatctactggaagcg
cttctccagcggcctggctttgggacaaaatgcatggagaacagcacggatccccagtgt
ttgcaagagaaacaaggcactttcatgaggccccaagttccccactctgagtggaagatc
ttcaaccaggggaactggactgcggaccggccttctcctgattgtgcgtgcagctctgag
gaggtccgcaggatgctcccagaatgccctgcaggggccggtggcatcccccctccacag
atcaagagatcgacaggagatatcttgcagaatctgactggtcgcaatatctcagactac
ctggtgaagacctaccctcagaccatgaagaaaagcctaacgtccgccaccaagaagtgg
atcaacgaattcagatatgggggcttctcccttggagccagaggctctcagagtgttcca
cagaccagccgaatggaggacgtcgtcatgacaatacggtcacgatacaacgtggcacag
aacagctcattggatcagctcctgggtcggcttccggagtttctgagtggattgaacagt
aagaacaatgttaaggtatggtacaacaacaaaggctggcacgccatggcatcgtttgtg
aatgtcatgaacaacggccttctacgtgccagcctgcccccagggccggagagattgaga
cacgggataaccgcctacaaccaccccctcaacctcaccaaggaacagctcaccgaaatg
gccatgatgacaacttcggtggatgtactggtgtccatctgtgtgatgtttgccatgtcc
tttgttccggccagcttcgtgctgtttctgatagaggagagggtcagcaaggccaagcac
cttcagtttgtcagcggcgtcaggcccatcctctactggctggctaacttcacctgggac
atgctgaactacacagtcccagccgtcatggtggtcctcatcttcattggcttccagcag
cagtcctatgtgtccgaatccaacctccccgctctggttctgctgctcctgctttatggt
tggtctgtcacgcctctgatgtacccagcctccttcctgttcagcgtacccagtaccgct
tacgtggtcctcacatcagtcaacctcttcatcgggattaatggcagcatcgccactttt
gtcttggagctgtttgtggatccgcacttgaacggcatcaacaagatcctgaagaaagtc
ttcctgatctttccccacttctgtctgggccgaggtcttatcgacatggccaagaaccag
gctatgtcggacgctttcagagactgggtatgacacaactttttgcgccaagcagacctg
gaccccctgaaatgggactttgtggggaagaacctgtttgccatggcagtggagggcgtt
gtgttctttctcttcaccatactgctacagtacaagttcttcattaattgcaggccctgc
tctgagcctgggctgctgcctcttggtccagaggacgaggacatcgctaaggagaggaga
gaggctaaagagcgggcgagcccagctgatatactcaccatgattgacctgagcaagcgg
ttcttgtgcaggtgtacaaagcggcgcaagaagccagcagtggatcgtctgtgtttggga
atcccacgtggagagtgttttgggctgctgggtgtgaacggggccggcaaaacctccacg
tttttcggcatgctgactggagacaccactgtcagctatggagaagccttccttagtcat
tcccaggtaagaccagtcaggagctcaccatcaagtcaaagtacagaaacataattgatg
tacacaaatgatgggtactgccctcaattcgatgccatctgtgaactgntgagggcaggg
cagcatctggagttctacgccaggatccgaggggtgccggaggagtccgtgtccaaggtg
gctcggtggggggtgaggacgctcgggctgacccagtacgcagagcgagaggccggggcc
tacagtggtggcaacaaacgcaaactctccaccgccattgcgcttatcggagcgccgcct
gttctattcctggatgagcccaccactggcatggaccccnaagccaagagatttctgtgg
aactgtatcctgactgtaatcaaagatggacgggctgttgttctcacatcccacagtatg
gaggaatgtgaagctctctgcacccgattggccatcatggtgaacggcaggttccagtgt
ctgggctctgttcagcacatcaaaaacaggtttggggacggctacaccatcgtcctgcgt
ctgngcgggttccatccacccaacacccctgagaacccgtgcccagtagactcctatatt
aagagctccttccccggcattgaactgatggagaggcaccagaacgtcttctgcagtacc
actgcccaccgtgcctgctctttggcgcgggtctttgacgtgctgtccagcaaccatgag
gagctgggcatcactgactactctgtgtcacagactaccctggaccaggtatag
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integrated database retrieval system
