Esox lucius (northern pike): 105029602
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Entry
105029602 CDS
T04894
Symbol
dhx34
Name
(RefSeq) probable ATP-dependent RNA helicase DHX34
KO
K20101
ATP-dependent RNA helicase DHX34 [EC:
5.6.2.6
]
Organism
els
Esox lucius (northern pike)
Brite
KEGG Orthology (KO) [BR:
els00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
els03019
]
105029602 (dhx34)
Enzymes [BR:
els01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
105029602 (dhx34)
Messenger RNA biogenesis [BR:
els03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
105029602 (dhx34)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
zf-C2H2_DHX34
Helicase_C
HA2_C
HA2_N
DEAD
AAA_22
AAA_19
Motif
Other DBs
NCBI-GeneID:
105029602
NCBI-ProteinID:
XP_012990989
LinkDB
All DBs
Position
LG01:4162833..4175212
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AA seq
1164 aa
AA seq
DB search
MSERRDSRSWDWDSSQCRAQMDQIFFRQHDYIQNGTTEHKDFWTFFDRFQRFKTKKDMSA
SGAPESSRKGHSDGKKTADLGLPKEYDARYRINMSVCTRDVEEKLVTGASDHRNSHRRSS
SGPGSQQIADCRLALLHFLDFNQRQSFGKLAKLRAEQKALPIFQYRDRIVELVRTHPVVV
VAGDTGCGKSTQVPQYLLSSGFSHIACTQPRRIACISLAKRVSFESLNQYGSKVGYQIRF
EGTRTPSTKLLFLTEGLLLRHIQADGALEQYQVLIVDEVHERHLHCDFLLGVLRSLLVTR
PDLRLILMSATINIKLFSDYFNSAPVLQVPGRLFPIQVIYQPIPPEEQASRSEKLDPRPY
LRVLQGIDQRYPAEERGDLLLFLSGVAEISTILEACQAYATHTKRWIVLPLHSTLSLAQQ
DKVFDISPPGVRKCIISTNIAETSVTIDGVRFVVDSGKVKEMSFDPKAKMQRLQEFWISR
ASSEQRKGRAGRTGPGVCYRLYAESDYEAFAPYPVPEIHRVALDSLILQMKSMSLGDPRS
FVFIDPPPAASIQTAVTYLRVQGALDPRGELTPIGCLLAQLPVDVVIGKMLVLGSILNLV
EPVLTVAAALSVQSPFLRSAQHNPDCATARQPLHSDQGDPFTLLNTFNAWVQVKGERGGA
SRKWCRRRGLEEQRLYEMVNLRRQFKELLRSHGLLEVLEERAPSGGGRGQRRERLTERRK
LHQLKREHDLAEGGRRKVLRLEDGQEVDGDSGSDAEPDRRDKEPTGESSVDIQEVKFKLR
HNVSELQEAAAASQDLSSRQQALLKLLLCRGLYPQLALPDEHNATRKDSEQVFHTRNKQG
VVIHPTSVFASDPEVLHVPEEGNREGPDKGDSSRHQLLAFVTLLETNKPYISNCVRVPAL
QALLLVANSLDSNADCTRLVVDGWLEVGLTGEEALRVLSSSLTLRASWENLLQAQLGKGT
LGAGAGSRAKAGGGLSEGLGVPGVSRKDLDKLSEGLVRFLLYTEVSYSLRRLTGLQVQNL
YVGPQPQTELSEGPAPNPLFPGMEVQPDPIKGGLRVTSYFTYNCLTDSKDLYSECLRTFW
SCPHCDLYSPVTPLERMSHEATCRPAGEQQNNQDREDDGMKGGASSTSVSGLARVYHCDV
CDQDLKLTSTEILKHKRQHMHSGR
NT seq
3495 nt
NT seq
+upstream
nt +downstream
nt
atgtctgagaggagggacagtcgtagctgggactgggacagttctcaatgccgagctcag
atggaccagatcttcttccgccagcatgactacatccaaaatggaaccacagagcacaaa
gatttctggaccttttttgaccgctttcagaggttcaaaaccaagaaggacatgtcggca
tctggagcgccagagagcagcaggaaagggcacagtgatgggaagaagactgcagatctg
ggtcttcctaaagagtatgatgcccgctatcggatcaacatgtcagtgtgtaccagagac
gtagaggagaagctggttactggcgcgtctgatcacagaaacagccacagacggagctct
tcaggccccgggagtcagcagatcgctgactgtcgcctggccttgctccacttcttagac
ttcaaccagaggcagagctttgggaagctggctaagctgagggcggagcagaaggccctc
cctatcttccagtaccgggaccgcatcgtggagctggtgcgtacccatccggtggttgtg
gtggcaggcgacactggctgtgggaagtccacccaggtgccccagtacctgctgtcgtct
gggttcagtcacatcgcctgtacgcagccccggcgtatcgcatgcatctccctggccaaa
agggtcagcttcgagagtctcaaccaatatggctccaaggttgggtaccagattcgcttt
gagggaacccgcaccccatccaccaagctgctgtttctgactgaggggctgctactgaga
cacatccaggctgacggagcgctggaacaataccaggtgttgatcgtcgatgaggtccac
gagaggcacctacactgtgacttcctgctcggggtcctgcgctccctcctggtcacccgt
cccgacctgcgcctgatcctcatgtccgccaccatcaacatcaaactcttctctgactat
tttaactcagctccggtgctacaggttcccggccggctcttccccattcaggtgatctac
cagcccatcccacctgaggagcaggcgtcccgctcggagaagctcgacccccggccctac
ctccgggtgctgcaggggatcgaccagcgctacccggctgaggagagaggagacctgctg
ctgttcctcagtggagtggctgagatatctaccatcctggaggcctgccaggcgtatgcc
acgcacaccaagcgctggatcgtcctgcccctacacagcaccctgtccctggcgcagcag
gataaggtttttgacatttctcctccaggtgtcaggaagtgtataatctccaccaacatc
gctgagacctctgtcaccattgatggggtgcgcttcgtagtcgactcaggcaaggtgaag
gagatgagctttgaccccaaggccaagatgcagcgtctgcaggagttctggatcagtcga
gccagttcggaacagaggaagggcagagcggggaggacgggcccgggggtgtgttaccgt
ctctacgccgagtcagactacgaggccttcgcaccctaccctgtccctgaaatacacagg
gtggccctggactcactcatactgcagatgaagagcatgagcctgggagacccgcggtcc
ttcgtcttcatcgacccacctcctgcggccagcatccaaacggcagtgacctacctccgg
gtgcagggggcgctagatccccgaggagaactcacccccatcggctgtctgttggctcag
ctgcccgttgatgtggtgatcggtaagatgctggtgctggggtccatcctcaacctggtg
gagccggtcctgacagtggccgctgcgctcagtgtccagtcgccatttctccgctcggca
caacacaacccggactgcgccacggcgcgccagcccctgcactccgaccagggagacccc
ttcactctgctcaacaccttcaatgcctgggttcaggtgaagggggagaggggcggcgcc
agcaggaagtggtgcaggagaagaggtcttgaggaacagagactgtatgagatggtcaac
ctacggagacagttcaaggagctgttgcgtagccatggtctgctggaggtgctggaggag
agggctccctctggtggaggccgtgggcaacgcagggagcggctgactgagaggaggaag
ttacaccagctgaagagagagcatgacctggcagagggaggccgtagaaaggtcctgagg
ctggaggatgggcaggaggtggacggagactctgggtcggacgcggagccagacaggagg
gacaaggaacccacgggggaatccagtgtggacatacaggaagtaaagtttaagcttcgc
cacaatgtgtctgagctccaggaagcagcggcggcaagtcaggacctgtcgtcacggcaa
caggcccttctgaaattgctgctctgccgaggcctgtatccccagctggcactacctgat
gagcacaacgccactcgcaaggactctgagcaggtgttccacaccagaaacaagcagggg
gttgtgatccatcccaccagcgtttttgccagcgacccagaggtgctgcatgtcccagag
gaagggaacagagagggacctgataaaggagacagcagtagacaccagctcctagccttc
gtaactctgctagagaccaacaaaccatacatttccaactgtgttagagttccagcccta
caggccctgttgctggtagcaaactccctggacagcaacgccgactgcaccaggctggtg
gtggacggctggttggaggtggggctgacaggggaggaggccctgcgggtcctgtccagc
tccctcaccctccgggccagctgggagaatctcctccaggcccagctgggaaagggcacc
ctgggggccggtgccgggagcagggccaaggctggaggggggctgagtgagggcctaggt
gtgcctggggtgtctcggaaagatctggacaagctcagtgaaggactggtccgcttcctg
ctctacacggaggtaagctacagtctccgtcgtctgacaggccttcaggtccagaacctt
tacgttggtccccagccccagacggagctctcagaaggacccgccccaaacccactcttc
ccaggaatggaggttcagccagaccccatcaagggagggctgcgggttaccagttacttc
acctataactgcctcacggactcaaaggacctgtacagtgagtgtctgagaacgttctgg
agttgtcctcactgtgacctgtacagtccagtcaccccgctagagaggatgagccacgag
gccacctgcaggccagccggggaacagcagaacaaccaggacagagaggacgatggcatg
aagggaggcgcctcctccacctcggtgtccgggctggccagggtctaccactgtgatgtc
tgtgaccaggacctgaagctcacctcaacagagatcctcaaacacaagagacagcacatg
cattctggacgttga
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