Esox lucius (northern pike): 105029687
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Entry
105029687 CDS
T04894
Symbol
ddb2
Name
(RefSeq) DNA damage-binding protein 2 isoform X1
KO
K10140
DNA damage-binding protein 2
Organism
els
Esox lucius (northern pike)
Pathway
els03420
Nucleotide excision repair
els04115
p53 signaling pathway
els04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
els00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
105029687 (ddb2)
09124 Replication and repair
03420 Nucleotide excision repair
105029687 (ddb2)
09140 Cellular Processes
09143 Cell growth and death
04115 p53 signaling pathway
105029687 (ddb2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
els04121
]
105029687 (ddb2)
03400 DNA repair and recombination proteins [BR:
els03400
]
105029687 (ddb2)
Ubiquitin system [BR:
els04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
105029687 (ddb2)
DNA repair and recombination proteins [BR:
els03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
105029687 (ddb2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_WDR5
WD40_WDHD1_1st
WD40
Beta-prop_EML_2
Beta-prop_IFT140_1st
WDR55
Beta-prop_RIG_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_Aladin
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_EML
EIF3I
Beta-prop_WDR36-Utp21_2nd
WD40_RFWD3
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR3_2nd
PEP5_VPS11_N
Motif
Other DBs
NCBI-GeneID:
105029687
NCBI-ProteinID:
XP_010901475
LinkDB
All DBs
Position
LG19:complement(3221332..3233561)
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AA seq
518 aa
AA seq
DB search
MAQPKKSLSEASKSKETLRKTYGETSGAKGRNPPKTLRQKLDRKTKMKTVIKSTSVLKQS
GPGSILHYIYHSTLGQSLHSQMRRCLQEPLVRSLSSYKLHRTLSPFDRRVTCLEWHPTRP
NTLGVGSKGGDIILWDFSMLSQASFIQGKGAGDFIGGMKFSPTDPSKVFLASGDGTLTLQ
NFDGHPPTVLSRVQDCGHDHHNVCLWYCCVDVSLSRQMLLAGDNMGRVSLLGIDGQEIFN
EKLHKAKVTHGEFNPRCDWLLATASVDHTVKLWDLRKMKDKNSYLHEMMHDKAVNSAFFN
PVDCSKLLTTDQYDQIRVYSSSDWSTPQQIIQHPHRQFQHLTPIKATWHPMYDLIVVGRY
PDERVCPGDLRTIDVYDANTGEVACQLLDHNATGIVSVNKFSPMGDVLGSGMGVNILVWN
REETLGHKQLAGQAQQEDVQPGRGRGRGRASSRSQHRRMGGAGRGERQGEDEDNIGKLKK
KLAFLEESSSSGTRARAAPSRGGNDDSKTRKGKKKLSG
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atggcccagcccaagaagagtctgtcagaggcatctaaatcaaaggagactttgaggaag
acatatggagaaacttctggggctaaaggacgaaatccccccaagacgttacggcaaaag
ttggacaggaagaccaagatgaaaacagtgatcaaatccacaagcgttctgaagcaaagt
ggacctggaagcatcttgcactacatttaccatagcaccctggggcagagccttcattct
cagatgagacggtgcctccaggagccgttggtgcgctccctgtcgtcgtataagctccac
cgtacgctcagccccttcgacagacgggtcacatgtctggaatggcaccccacacgtccc
aacaccctgggggtgggatccaaagggggtgacatcatcctctgggacttcagcatgctc
tcccaggcctccttcatacaagggaaaggagcaggggacttcattgggggcatgaagttc
agcccaacagacccgtccaaagtcttcctggcatctggtgacggcacattgaccttgcag
aacttcgatggccatccacccacggttctgtccagggtccaggactgtggtcatgaccac
cacaatgtctgcctgtggtattgctgtgtggatgtgtccctgagcagacagatgctgctg
gcaggagacaacatgggacgagtttcccttctgggcattgatggccaggagatcttcaat
gagaagttgcacaaggccaaagtgacgcatggtgaattcaacccacgctgtgattggctt
ttggcgacggcgtctgtcgaccacactgtcaagctttgggacttgaggaagatgaaggac
aagaacagctacctccacgagatgatgcacgacaaagctgttaactcagcctttttcaac
ccagtggactgttccaagctcctgaccacagaccaatatgaccagatcagggtgtactcc
tcatctgattggtcgacgcctcagcagatcatccagcacccacacaggcagtttcagcac
ctcacacctatcaaggccacctggcaccccatgtatgacctgatcgtggttggccgctac
cctgatgagagggtgtgtcctggtgaccttcggaccattgatgtttacgacgccaataca
ggcgaagtggcctgccagctgctggaccacaatgcaactggcatcgtgtctgtcaacaag
ttcagtccgatgggtgatgtgttggggtctggaatgggagtgaatattctagtgtggaac
agagaggaaacattgggtcataagcagctggcaggacaggcccaacaggaagacgttcag
cctggcagagggagagggagagggagagccagctccagaagccagcacagaagaatgggt
ggggccggcagaggggagaggcagggggaggatgaggacaacattgggaaactgaagaag
aagctggctttcctggaagagtcgtcctcctcagggacccgggccagagcagcgccctcc
aggggtggtaatgatgacagcaagacacggaagggcaaaaagaaattatccgggtag
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