Esox lucius (northern pike): 105029714
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Entry
105029714 CDS
T04894
Symbol
polr1b
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA2
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
els
Esox lucius (northern pike)
Pathway
els03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
els00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
105029714 (polr1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
els03021
]
105029714 (polr1b)
Enzymes [BR:
els01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
105029714 (polr1b)
Transcription machinery [BR:
els03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
105029714 (polr1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpa2_4
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
Motif
Other DBs
NCBI-GeneID:
105029714
NCBI-ProteinID:
XP_010901520
UniProt:
A0A6Q2YEV4
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All DBs
Position
LG06:complement(28712284..28723748)
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AA seq
1134 aa
AA seq
DB search
MDCVTKWSNLPTSPSLKQLTEPGYGIPRKEQHAAVQDLTKAHIESFDQAVSDGLCRAVQA
IPPLEFMFRNDRISLAFVEATIFKPVVGKGSICRDLRVFPAECRGRRCSYRGKIVADVSW
SINGIPKGIIKQSLGQVPIMVKSKLCNLHELSPKELIEHHEEAEEMGGYFIVNGIEKVIR
MLIMPRRNYPIAMSRPKWKNRGQGYTQYGISMHCVKEEHTAINMNLHYLDNGTVMLNFIY
HKELFFLPLGFALKALVDFTDFQIFQELIKGREENSFYKSCVSEMLRIVMEEGCTTRRKV
LSYLGERFRVKMNLPEWYTHEQCANYLLDQCICIHLKSDVEKFYLLCLMTRKLFTFAKQE
CMEENPDSLMCQEVLTPGRLYLMYLKERMSAWMVSVKLSLEKKAHRLTGGITSDNLVKMF
NMGSDVTKAFEYLLATGNLNSKTGLGMLQNTGLCVVADKLNFIRYLSHFRCVHRGAAFAK
MRTTSVRRLLPESWGFLCPVHTPDGEPCGLMNHMTAHCDIIAQALPTTTLPALLCSLGVT
PVDGTPGRAYSDCYPVLLDGAMVGWVETEMAPLLVDSLRRFKVLNEKRIPPWTEIVLVPQ
TGKASMYPGLFLFTTPCRMVRPVRNLALGKEELIGTFEQLYINVGISEDEIEPGVTTHQE
LFPHSMLSVVANFIPYSDHNQSPRNMYQCQMGKQTMGFPLHSFQERSDNKLYRLMTPQSP
LVRPVMYDHYNMDNYPIGTNAIVAVISYTGYDMEDAMILNKSSWERGFAHGCVYKTELVD
LTEKIKGEDNLVFGIKPGDPKVKDKLDVDGLPFIGSVLQFGDPFYSYVNLNTGQSFVYFY
KSQESCVVDNIKVCSNDAGTGRFKRICITVRVPRNPTIGDKFASRHGQKGILSRLWPAED
MPFTESGMTPDILFNPHGFPSRMTIGMLIESMAGKSGALHGLCHDATPFTFSEESSALEH
FGDMLRAAGYNHYGTERLYSGLSGLELEADIFIGVVYYQRLRHMVSDKFQVRTTGARDKV
TNQPVGGRNIQGGIRFGEMERDALLAHGTSFLLQDRLFNCSDRSTAQVCVDCGSLLSPLL
EKPPPYWSSTRHRNTVCALCGKSDSIDTVSVPYVFRYFVAELAAMNIKIKFDVK
NT seq
3405 nt
NT seq
+upstream
nt +downstream
nt
atggattgtgtaacgaagtggagtaatttacctacaagtcctagccttaaacagttaaca
gaaccaggctatggcataccgaggaaagaacaacatgccgctgttcaggacctaacgaag
gctcatattgagtcgtttgatcaagccgtttcagatggactttgtcgtgctgtgcaggca
atccctcccttagagtttatgtttagaaatgaccggatcagtttggcctttgtagaggcc
accatctttaaaccagtggtgggcaaagggagcatctgccgggacctgagggtgtttccg
gccgagtgcagagggagacgctgctcctaccggggaaagattgtggcagatgtcagctgg
tctataaatgggattcccaaaggcatcatcaagcagtccctgggccaggtgcccatcatg
gtgaagtctaagctctgtaaccttcacgagctctctccgaaagaacttattgaacaccat
gaggaagctgaggaaatgggtggttattttattgttaatgggattgagaaggttattcgc
atgctgatcatgccaaggaggaactatcctattgctatgtcaagacccaagtggaagaac
agaggccaggggtacacccagtatggtatctcaatgcactgtgtgaaagaggagcataca
gctatcaatatgaatctgcattatctggacaatggcaccgtgatgctgaacttcatctac
cacaaagagctttttttcttgcccctggggtttgcactcaaggccctagtggacttcaca
gatttccagatcttccaggagcttataaaaggtcgtgaggagaactccttctacaagagc
tgtgtgtctgagatgctgcgaattgtcatggaggagggctgcacgacccgcagaaaggtc
ctcagctaccttggtgaacgcttccgggtcaaaatgaacctgccagagtggtacacccac
gagcagtgtgccaactacctgctagaccagtgcatctgtattcacctgaagtcggatgtg
gagaagttctacctgctgtgtttgatgacgcggaagctattcacgtttgccaagcaggaa
tgcatggaggaaaacccggacagtcttatgtgtcaggaggtgctcacaccaggacggctc
tacctaatgtaccttaaggaaagaatgtctgcctggatggtgtcagtgaaactgtctttg
gaaaagaaggcccatcggctcactggagggataacctctgacaacctggtgaagatgttc
aacatgggctctgatgtgaccaaggcatttgaatatctgctggccactggaaatctcaac
tcaaagacgggtctgggcatgctccagaacacgggactgtgcgtggtggctgacaagctc
aacttcatccgttacctgtcccacttccgatgcgtgcaccgaggggcggccttcgccaag
atgaggaccacgtcggtgcgtcgcctgctgcccgagtcctggggcttcctgtgccccgta
cacacccccgacggcgagccgtgcggtctgatgaaccacatgacggctcactgtgacatc
atagcccaggccctgcccaccaccacactccccgccctgctctgttccctgggtgtgact
cccgtagacggcacgccgggtcgagcttactcggactgctaccccgttctcctggacggg
gccatggtgggctgggtggagacggagatggccccacttctcgtagattccctccgcagg
ttcaaagtgttgaatgagaagaggatccccccttggaccgagatagtcctggttccccag
accggcaaggccagcatgtacccaggcctgttcctcttcaccaccccctgccgcatggtc
cggcctgtccgcaacttggccctgggcaaggaggaactgatcggtacctttgagcagctc
tacatcaacgtgggcatcagtgaagatgagattgaacctggtgtgaccacccaccaggaa
ctcttccctcacagcatgctcagcgtggtggctaacttcatcccttactcagaccacaac
cagagtcccaggaacatgtaccaatgccagatgggtaaacagacgatgggctttcccctc
cactcattccaggagcgctcagacaacaagttgtaccgcctcatgaccccgcagagcccc
ctggtccggcctgtcatgtatgaccactacaacatggacaattaccccattggcaccaac
gccattgttgctgtaatctcctatactggctatgacatggaggacgccatgatcctgaac
aagtcgtcgtgggagaggggctttgctcacggctgtgtttacaagactgagctggtggac
ctaacggagaagataaagggcgaggacaacctggtgtttgggatcaagcccggtgacccc
aaggtgaaggacaagctggatgtcgacgggctgcccttcatcggatctgtgctgcagttc
ggggaccctttctatagctatgtcaacctcaacactggacagagctttgtgtacttctac
aagagtcaggaaagctgtgtggtagacaacatcaaggtgtgcagcaacgacgccggaaca
ggccgcttcaagcgcatctgtatcacggtgcgggttccccgtaaccccaccattggggac
aagtttgccagccgccacggtcagaagggcatcctgagccggctgtggcccgctgaggat
atgcccttcacagagagcggcatgacacctgacatcctgttcaacccgcatggcttcccc
tcccgcatgaccatcggcatgctcattgagagcatggcgggcaagtcgggcgccctccat
ggcctgtgccacgacgccacgccattcaccttctctgaggagagctcagcgctggagcac
ttcggcgacatgctgcgtgccgccggctacaaccactatggcaccgagcggctctacagt
ggcctcagcgggctggagctggaggcggatatattcatcggcgtggtctactaccagagg
ctgcgtcacatggtctctgacaagttccaggtgaggacgacaggggcgcgagacaaggtg
accaaccagccggtgggcggaaggaacatccaggggggtatacgcttcggggagatggag
cgtgatgccttactcgcccacggcacctccttcctgctccaggaccgcctgttcaactgc
tccgaccgctcgacggcccaggtttgcgtggactgcggcagcctgctgtccccgttgctg
gagaaaccgccgccatattggtcatccacgcgccaccggaacactgtctgtgccctgtgc
ggcaagagtgactcgatcgacacagtgtctgtgccatacgttttccgctactttgtcgcg
gagctggcggctatgaacatcaaaatcaaatttgacgtgaagtga
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