Esox lucius (northern pike): 105029766
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Entry
105029766 CDS
T04894
Symbol
tsen34
Name
(RefSeq) tRNA-splicing endonuclease subunit Sen34 isoform X1
KO
K15323
tRNA-splicing endonuclease subunit Sen34 [EC:
4.6.1.16
]
Organism
els
Esox lucius (northern pike)
Brite
KEGG Orthology (KO) [BR:
els00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
els03016
]
105029766 (tsen34)
Enzymes [BR:
els01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
105029766 (tsen34)
Transfer RNA biogenesis [BR:
els03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing endonuclease complex
105029766 (tsen34)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_int_endo
Motif
Other DBs
NCBI-GeneID:
105029766
NCBI-ProteinID:
XP_010901578
UniProt:
A0AAY5L860
LinkDB
All DBs
Position
LG01:complement(39304759..39308616)
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AA seq
306 aa
AA seq
DB search
MDLSEANITKQVSKDDAGEGSMARELIKINFCGSTPLLWRTEDLKAARELGFVGTLVGSL
ARQPRQNTRLGRPLELLLEEGRLMADMERAAVSGLDSKSEDPEVSPAVVEQYYAGLENSF
QEQSALALEDRKMTLTRVLTEKQKEFSKGQEDADSNVRNRLEALDRSFSFPRTAMSVQLC
TARAGLAHCPQERQFLTADWPMPQDERCKCRFQVFKDLRRRGFYLTSAGKFGGDYLVYPG
DPLRFHAHFIAVCVSMDESMPLCDVLAIARLGSNVKKTVLLCSSGESQDDEREEVVYTSL
QWSGMA
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atggatttgtcagaggcaaatataacgaaacaagtgtctaaagatgacgcgggagaagga
agtatggccagagagttgattaaaataaacttctgtgggtctacccctctactgtggcgt
acggaagacttgaaagcggctcgtgaattgggcttcgtagggacactggtaggttctctt
gctcgacagcctaggcagaacacgcgcctggggagacctctcgagttgctactggaggag
ggacgactgatggcggacatggaaagagctgctgtttccggcctagactcaaaaagtgag
gatcctgaggtaagcccagcggtagtggaacagtactatgcaggtctagagaacagcttt
caggaacagagtgccctggcattagaggaccggaagatgacacttaccagagttctcact
gagaaacaaaaagagttttcaaaaggccaggaggacgcagacagtaatgtgagaaaccgc
cttgaagctctggaccgaagcttctctttcccgcgcacagccatgtctgtacagctttgc
acggcacgagcaggactggcccactgtccccaggagcgccagttcctgactgcagactgg
cctatgccacaggacgagaggtgcaagtgccgtttccaagtcttcaaggacctgagacgc
cggggcttctacctcacatcggctgggaagtttggcggagactacctagtgtatccaggt
gaccctctccgtttccacgctcatttcattgcggtgtgtgtctccatggatgagtcaatg
cccctgtgtgatgtactggccattgccaggctaggctctaatgtgaaaaagacagtcctg
ctctgttcatcaggggaaagccaggacgatgaaagggaggaggtggtgtacacatctcta
cagtggagtggaatggcatag
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