Esox lucius (northern pike): 105029886
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Entry
105029886 CDS
T04894
Symbol
xrcc5
Name
(RefSeq) X-ray repair cross-complementing protein 5 isoform X1
KO
K10885
ATP-dependent DNA helicase 2 subunit 2
Organism
els
Esox lucius (northern pike)
Pathway
els03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
els00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
105029886 (xrcc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
els03400
]
105029886 (xrcc5)
DNA repair and recombination proteins [BR:
els03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA-PK complex
105029886 (xrcc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
Ku_N
Ku_PK_bind
Ku_C
VWA_2
VWA
Motif
Other DBs
NCBI-GeneID:
105029886
NCBI-ProteinID:
XP_028971602
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Position
LG20:1794572..1816138
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AA seq
723 aa
AA seq
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MAPSAKSALVLCVDVGFSMSNSGPGQEPPFEQAKKVIQKFVKRQVFAENKDELGLVLFGS
DATKNNLAKDGQYQNIYVHRNLMIPDFGLLEEIQNDIHPGGQQGDWLDALVVCMDLLQNE
TLGKKYDRLNIAVLTDLDSPVSPDQLDIITGNLKRAGITLQFFLPFPMDTDEAGGGDVGG
SGPPHGGKGLSREQQQGLDLVKQVMMSLDEEDGLDEVQTFSDAIEKLSVFKHVEKRPMAW
PCTLTIGSCLTIKIVGYKAVCEERPRKSWSVVDAQTHQKEDVKRDVVYCVDDDEETEVPK
DDTIQGFRYGSDIVPFSKVDQEQMKYKTDGKSFAVLGFAKQSLINRHHFMGNQILKVFAP
KDDEHAGVALSALIRALDELKMVAVVRYVYARNGNPQVGAAFPCIKEKYECLMYVQLPFM
EDLRQYTFPSLENNKKYTPSENQLSVVDSLIDSMMLVEENEDGEKKDLFKVNHIPNPQYQ
RLFQCLHHRALNPSAPLPPVEPWLITALQRPQAVAARCRAPLENMKKLFPLKEVVKKKEL
KTSKELFGKGIEEPDVKKAKVDEDQDFNLADITEGSITQVGSVDPARDFCSLIRQKSLPF
GEVCQQLTGRIEQLLGNKNTHYYMKCISCIQSFREQSVKIGNADHYNSYLRSLKGSIPVR
GLQELWDLLVQDSLTLISKDEVDGSTVSKQDATEFLTAEEKKEMTSAPVVDSTGDVDDLL
DMM
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atggcgccgtccgcgaagtctgcacttgtcctttgtgtggatgtgggtttctccatgtcc
aactcaggcccaggacaggaaccgccctttgaacaggccaagaaagtcatccagaagttt
gttaaacggcaggtgtttgcagagaataaggatgagttgggcctcgtgttgtttggatca
gatgccacaaagaacaacctggccaaagacggccaataccagaacatctacgtacatcgc
aacctcatgattccagactttgggctgttggaggagatccagaatgacatacatcctggt
ggtcagcagggcgactggttggatgctctggttgtctgcatggatctgctgcagaatgaa
acgcttggaaagaaatatgaccgtctgaacattgcggtgctaactgacctggacagcccc
gtcagccccgaccagctagatattatcacaggcaacctgaagagggctggcatcaccctg
cagttcttccttcccttccccatggacacagacgaggccgggggcggcgatgtggggggg
tccggacccccccacggtggtaagggtctgtccagggagcagcagcagggtctggacctg
gtcaaacaggttatgatgtccctggacgaagaggacggtctggatgaagtccaaaccttc
agtgatgccattgagaagctgtccgtgttcaagcatgttgagaagagaccaatggcgtgg
ccctgcactctgaccatcggcagctgcctgaccattaagatcgttggctacaaggctgtg
tgtgaggagcggcccaggaagtcatggtcggttgtagatgcccagacacatcagaaggag
gatgttaagagagacgtagtgtactgtgtggacgatgacgaggagacggaggtccctaag
gacgacaccatccaagggtttcgttatggcagtgacattgtacccttctccaaagtggac
caggagcagatgaaatacaagacagacgggaagagttttgcagtgctgggcttcgccaaa
cagagtctgatcaacaggcaccactttatgggcaatcagatcctcaaggtgtttgcccct
aaagatgacgagcatgcaggtgtagccttgtcagctctgatccgggctctggatgagctg
aagatggtggcagtggtccggtacgtttatgctcgcaacggaaatcctcaagttggagct
gctttcccctgtatcaaggagaagtatgagtgtctgatgtacgttcagctgcccttcatg
gaagacctcagacagtacacattcccctctctggagaacaacaagaaatacactccttca
gagaaccagctatcagtggtggactctctgattgactccatgatgctggtggaggagaat
gaggatggagagaagaaagacctcttcaaggtcaaccacatccctaacccccagtaccag
aggttattccagtgcctgcaccatcgggcattgaacccctcggcccccctccctcctgtg
gaaccctggctgattacagctctccagcggccccaagcagtggccgcccgctgtcgcgcc
cctctggagaatatgaagaagttgttccctctgaaggaggtggtcaagaagaaagaacta
aagaccagcaaggagctgtttggaaaaggcattgaggagccagatgttaagaaggccaaa
gtggatgaggaccaagactttaacctggctgacatcactgagggaagcatcacacaggtt
ggtagtgtggatccagcacgagacttctgctccctgattcgtcagaagagtcttcctttt
ggagaggtgtgtcaacagctgaccggcaggatagagcagttgctgggcaacaagaacaca
cattactacatgaagtgcatcagctgtattcagtctttcagagagcagtctgttaagatt
ggtaatgctgatcactacaacagctacctccgctctctaaagggcagcatcccagttcga
ggccttcaggagttatgggatcttctagtccaagactccttgactctgatcagcaaggat
gaggttgacggaagcacggtttccaaacaagatgccacagagttcctcactgcagaggag
aagaaagagatgacgtcagcccctgtggtggacagtactggtgacgtggatgacttgctt
gacatgatgtga
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