Esox lucius (northern pike): 105029954
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Entry
105029954 CDS
T04894
Name
(RefSeq) pre-mRNA-processing factor 19
KO
K10599
pre-mRNA-processing factor 19 [EC:
2.3.2.27
]
Organism
els
Esox lucius (northern pike)
Pathway
els03040
Spliceosome
els04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
els00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105029954
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
105029954
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
els03041
]
105029954
04121 Ubiquitin system [BR:
els04121
]
105029954
03400 DNA repair and recombination proteins [BR:
els03400
]
105029954
Enzymes [BR:
els01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
105029954
Spliceosome [BR:
els03041
]
Complex B
Other components
Prp19 complex
105029954
Complex C
Prp19-CDC5 complex
105029954
Ubiquitin system [BR:
els04121
]
Ubiquitin ligases (E3)
U-box type E3
105029954
DNA repair and recombination proteins [BR:
els03400
]
Eukaryotic type
Other factors with a suspected DNA repair function
PSO4 complex
105029954
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Prp19
ANAPC4_WD40
NBCH_WD40
U-box
PROPPIN
RMC1_N
Cytochrom_D1
Nup160
Nucleoporin_N
zf-Nse
ATG16
Cep57_MT_bd
Motif
Other DBs
NCBI-GeneID:
105029954
NCBI-ProteinID:
XP_010901855
UniProt:
A0A6Q2WSE7
LinkDB
All DBs
Position
LG04:complement(1252957..1257249)
Genome browser
AA seq
505 aa
AA seq
DB search
MSLVCAISNEVPEHPCVSPVSNQVFERRLIEKFIAENGVDPMNGQPLSEEQLIDIKVSHP
IRPKAPSSTSIPAILKSLQDEWDAVMLHSFTLRQQLQTTRQELSHALYQHDAACRVIARL
TKEVTAAREALATLKPQAGLVAPQSVPTSQPAAGGGGGEPMEVSEQVGMSQEIIQKLQDK
ATVLTTERKKRGKTVPEDLVRAEDLSKYRQVASHAGLHSASVPGILCMDLCPSDTNKVLT
GGADKNVVVFDKSEEQIVATLKGHTKKVTSVIYHPSQSVVFSASPDCTIRVWSVTAGNCV
QVVRAHEGSVTGLSLHATGDFLLSSSEDQYWAFSDIQTGRVLTKVTDEAAGVALTCAQFH
PDGLIFGTGTADSQIKIWDLKERTNVANFPGHSGPVTSIAFSENGYYLATGAQDSSVKLW
DLRKLKNFKTIALDNNYEVKSLVFDQSGTYLAVGGSDIRVYICKQWSEVLNFSDHSGLVT
GVAFGENAQFLSSAGMDRSLKFYSL
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atgtctttggtttgcgcaatttccaatgaggtcccggaacacccctgtgtgtccccggtg
tccaaccaggtgttcgagcgccgattgatcgagaagttcatcgcggaaaatggagtggac
cctatgaacggtcaaccactgtccgaggagcaacttatcgatattaaagtgtctcatcct
atccgaccaaaggctccctcctctaccagtatccctgccatactcaagtctcttcaggat
gagtgggatgcagtgatgttgcacagtttcactctgaggcaacagctgcagacaaccagg
caggagctttctcatgccctgtatcaacacgacgcggcctgcagagtcatcgcccgtctc
accaaggaggtgactgccgccagagaggccctggccacacttaagccccaagccggattg
gtggctccccagtctgtgcctacctctcagccagccgctgggggtggtggtggggagccc
atggaggttagtgaacaggtgggaatgtctcaggagatcatccagaagctccaagataag
gccactgtccttaccacagagagaaagaagaggggcaagaccgtgccggaggatctggtc
agagctgaggatctgagcaagtatcgccaagtggcttcccatgctggtcttcacagtgcc
agtgtgccagggattctgtgtatggacctgtgtccttcagacacgaacaaggtgctcact
ggtggggccgacaagaatgtggtggtgtttgataagagtgaggagcagattgtcgccacc
ctcaagggtcacaccaagaaggtcacctctgtcatctaccacccctcccagtccgttgtg
ttctctgcttctcccgactgcaccatccgtgtgtggtctgttaccgccggcaactgtgtc
caggtggtgcgagctcacgaggggagcgtgaccggactgtctcttcacgccaccggagac
ttcctgctcagctcctccgaggaccagtactgggccttctctgatatccaaactggccga
gtcctcaccaaagtcactgatgaggctgctggcgttgccctgacttgtgcgcagttccac
cctgacgggctgatctttgggacgggcactgccgactcccagatcaaaatctgggatctg
aaggagcgcacaaatgtggccaacttccctggccactccggccccgtcacctccatcgcc
ttctctgagaatggatactacctggccacaggtgcccaggacagctctgtgaagctttgg
gatctgaggaaactgaagaacttcaagacaatagccctggacaacaactacgaggtgaag
tcgctggtgtttgaccagagtggtacttatctggctgtgggagggtctgacatcagggtg
tacatctgcaagcagtggtctgaagttctcaacttcagtgatcactctggtctggttact
ggtgtggcatttggagaaaatgctcagttcctttcctctgctggaatggaccgaagcctt
aagttctatagcctgtag
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