Esox lucius (northern pike): 105029974
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Entry
105029974 CDS
T04894
Symbol
exosc8
Name
(RefSeq) exosome complex component RRP43
KO
K12586
exosome complex component RRP43
Organism
els
Esox lucius (northern pike)
Pathway
els03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
els00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
105029974 (exosc8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
els03019
]
105029974 (exosc8)
Messenger RNA biogenesis [BR:
els03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
105029974 (exosc8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
105029974
NCBI-ProteinID:
XP_010901892
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Position
LG07:11094946..11100237
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AA seq
277 aa
AA seq
DB search
MAAGFKTAEPLEYHRSFLKENCRPDGRELGEFRTTTLNIGSISTADGSALVKIGNTTVMC
GIKAELANPAVEVPSRGYMVPNVDLPPLCSSRFRPGPPGEQAQAASQFIADVIESSEVIQ
TEDLCIVKGKLCWVLYCDIMCLDYDGNVLDACLIALLAALKNVRLPEVTFSEDSEVPKVN
LENRRGLTIHKHPVGASFAVFDDSIMIVDPTAEEETLSTAIITVVMDEEKHLCALHKPGG
TSLSGEKLQDCINRTTIRHKEVHKLINKVIQSVKTPE
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atggcggctggattcaaaaccgccgagcccttggaataccacaggagctttctgaaggag
aactgccgccctgatggaagggaactgggtgaatttagaaccactactttgaatataggt
tctatatctacagcagatgggtctgccctggttaagattggaaacaccacagtcatgtgt
ggcattaaagcggaactggccaacccagccgtggaggtccccagcagaggctacatggtt
cccaatgtggacctgccccctctgtgctcgtcccggttccgtccaggaccccctggggaa
caggcccaggcagccagccaattcatcgctgatgtcatagagagctctgaagtgatacaa
acagaggatttatgcattgtgaaaggaaagctgtgttgggtcctttactgtgacatcatg
tgtctggactatgatggcaatgtgttggacgcctgtctcatcgccctgctggctgctctc
aagaatgtgcgtctccctgaggtgactttcagtgaggactccgaggttcctaaagtgaat
ctggagaaccggagaggtctgaccatccacaaacatccagtaggggcctcctttgccgtg
tttgatgactccattatgatcgtcgaccccaccgctgaggaggaaaccctgtccacagcc
ataatcaccgtggtaatggatgaggaaaagcatctctgtgccctccacaagccaggtgga
acttcgttatctggtgagaagcttcaggactgcatcaaccgcaccacgatcagacacaag
gaggtccacaaactcatcaacaaagtcatacagagtgtcaagacacccgaataa
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