Esox lucius (northern pike): 105030020
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Entry
105030020 CDS
T04894
Name
(RefSeq) integrin alpha-M
KO
K06461
integrin alpha M
Organism
els
Esox lucius (northern pike)
Pathway
els04145
Phagosome
els04514
Cell adhesion molecules
els04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
els00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
105030020
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
105030020
09142 Cell motility
04810 Regulation of actin cytoskeleton
105030020
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
els04131
]
105030020
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
els04147
]
105030020
04515 Cell adhesion molecules [BR:
els04515
]
105030020
04090 CD molecules [BR:
els04090
]
105030020
00536 Glycosaminoglycan binding proteins [BR:
els00536
]
105030020
Membrane trafficking [BR:
els04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
105030020
Exosome [BR:
els04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
105030020
Cell adhesion molecules [BR:
els04515
]
Integrins
Integrin alpha subunits
105030020
CD molecules [BR:
els04090
]
Proteins
105030020
Glycosaminoglycan binding proteins [BR:
els00536
]
Heparan sulfate / Heparin
Adhesion molecules of cell surface
105030020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
ITGAX-like_Ig_3
FG-GAP
Integrin_A_Ig_2
VWA_2
Integrin_A_Ig_1
FMN_bind
GH101_dom-5
Lipoprotein_17
Motif
Other DBs
NCBI-GeneID:
105030020
NCBI-ProteinID:
XP_028975917
LinkDB
All DBs
Position
LG05:31157856..31238144
Genome browser
AA seq
1148 aa
AA seq
DB search
MTFMSFMYTAWVLWPSVCQVTLSFNIDPVAWKYISKPAAGFGYKVVQMNSTSLLVSAPLE
QYEHNRRGKVYQCLVEDTSCKPLPIQEASFGVNMSMGLSMTQDPKTSKTLICGPTIPREC
KTMTTYNGMCLEMYTNCNVFIGSSVHSSLKECPGQMDIAFLLDGSGSIITADFNQMKAFV
KNLIREFLKGDVQFAIAQYSNNCKIHFDFNDFPFGSWENKINGIGQISGGTFTARAIKKV
VKNVFSINGGSRPMAKKVLIVITDGNSHDSIGLDKAAYEAESKMIIRFAIGVGAVFSSKH
GRGELETIASSPPSKHMFQVGSFQALDQIKDTLKSSIFSLEGSQTGDSIKMEMAQEGFSA
AYKPAGGFHVASVGAFQWRGAYQEYTSATETPTLKQSPNMEPDSYMGYSMAVARTRTRQF
TILGAPRYKHTGRVEVFCPGVNYKPVDFSGQIGAYFGAEICAVDIDNDSYMDFVLISAPT
FTDRQREGRVYVCTISDWSGVVCGFAAEMTLQGDVGKIGRFGTSLAQLPDLNVDGFNDLA
VGAPLENNGKGSVYIFHGSRIGISNIYSQKISGFDVQSGLKFFGLSISQSSLDMSSDSLP
DLAVGSKGAVLLLRSKPIATIRTLVSFHPPKISTDASRSNIALKHTATVCFTMTKNTADN
TKGEAKINYTLTLDVTRQAPNYRAYYNNQDKMRKKTKTVTLSQGQQCFDHIFFIMVEPED
VLNELSNELDYTFEGLPSSGGLSLSLSQQTLTTTYHPLGFVTRCGTDNNCVDNLKVDFNF
TGSSEMKVGIDDVLNVTVSVESREENSYNSRVILTYPAGLSFRRLITIQGKVECNSIDSE
HGVTWGKSDCTINKPIFKSNSKVFFVISYGIDSKSHFEQIVTFTANASSGNNEHAPASEL
YKVKRIGVKYRIYVLITRHKDSTKYINFTAGKNVMQKHVNQSFVVVNYVRDFNLTVKIKV
PMKLGDKYIWADPDVLKIPGCRREHDEKPIATDFVDKLKKKAAVDCSVAMCWVFVCSVVM
RKDTHNTYNIAGNVSSGWIEQIGLESAHLSLISSATLEYDRNQYIYFSLDSHQNIPPVQT
IETEVEVYPEIDFTKEIIGGAVGGLFLLALITPGLYKAGLFKSQFKQIMQDAPGDEPGGD
VQETVPAE
NT seq
3447 nt
NT seq
+upstream
nt +downstream
nt
atgaccttcatgtccttcatgtacacagcatgggtgctatggccttcagtatgtcaagtc
actttgagttttaacattgaccctgttgcttggaagtacatcagcaaacctgctgctgga
tttggatacaaggtggtccagatgaactcaacaagcttgcttgttagtgcacctctggag
cagtatgagcataataggaggggaaaagtttaccaatgtttggttgaagacacatcatgc
aagccattgccaatacaggaggccagttttggagtcaatatgtccatggggttgtcaatg
acacaggatccaaagacgtcaaaaaccctgatatgtggtccaacaattccaagagaatgt
aaaaccatgacaacatacaatggcatgtgtctggaaatgtacacaaattgtaatgttttc
attggatcctctgtgcattcatctctaaaagaatgtcctgggcaaatggacatagccttt
cttttggatggttcaggcagtattatcacggcagattttaatcaaatgaaagcatttgta
aaaaatctgatccgtgaatttctcaaaggggatgtccagtttgcaattgcccagtattca
aataattgcaagattcattttgacttcaatgattttccatttggatcgtgggaaaataaa
attaatggaattggtcaaataagtggagggacatttacagcaagagccatcaaaaaagtt
gtcaaaaatgtattttcaattaacggtggatctcgaccaatggctaaaaaggtcttgata
gtcattacagatggaaactcccatgacagcattggtctggataaagcagcctatgaagct
gaatccaaaatgattattcgatttgccattggggtgggggctgtcttttcatcaaaacat
ggaagaggagagttagaaacaattgcctcctctccaccaagtaaacacatgtttcaagtg
ggaagcttccaagcgcttgatcaaatcaaggacacattaaagagcagcattttttctttg
gaaggatctcagactggagactccattaagatggaaatggcccaagaaggatttagtgca
gcatacaagcctgcgggaggattccatgtggcatctgttggagccttccaatggaggggg
gcttaccaggaatacacaagtgccactgaaacccccactttaaaacagagtccaaacatg
gaaccagatagctatatgggttattccatggcagttgctcgtacaagaactcgccagttt
accattttaggtgctccaaggtataaacacacaggtagagtggaggtgttctgccctgga
gtcaactacaagccagtagatttttcaggacagattggtgcgtattttggggccgaaatt
tgtgcagtggatatagataatgactcctatatggacttcgtcctgatatctgctccaaca
tttactgacagacaaagagagggcagggtctatgtttgcactatcagtgactggtctgga
gtggtctgtggatttgctgctgagatgacactgcagggggatgtagggaagatcggcaga
tttggaacttctcttgcccaacttcctgatttgaatgtagatggttttaatgatctagct
gttggagcacctctggagaacaatggcaaaggaagtgtctacatattccatgggtcaaga
attggaatcagtaacatctattctcagaaaatttcaggctttgatgtacagtctggatta
aagttttttggactatccatcagtcagtcttctctggacatgagttcagattctctccca
gatttggctgtgggatctaagggagctgtcctcttactcaggtcaaagcctatagcaaca
attaggacactagtgtccttccatcctcccaaaatatctactgatgcttcaagaagcaat
attgctctgaaacacactgctacagtctgtttcaccatgacgaaaaacacagcagacaat
accaaaggtgaagcaaagattaattatactttgaccctggatgtgacccgccaagctcca
aactatcgtgcttattataacaaccaagataaaatgaggaagaaaaccaaaactgtcaca
ttgtcacagggacagcagtgctttgatcatatcttctttattatggtagaaccagaagac
gtcctcaatgaattgtctaatgaacttgactatacatttgaagggttgccttcgtctgga
ggactcagtttaagcctttcccaacagacattgactacaacatatcatcctttaggcttt
gtgactagatgtggaactgataacaactgtgtggacaacctcaaagtggattttaatttc
actggatcctcagagatgaaagtgggcattgatgatgtattaaatgtgacagtatcagtt
gagagccgggaagaaaactcttacaatagtcgagtcattctcacttaccctgcaggactg
tcattcaggaggctcatcacaatccaaggaaaagtggagtgtaactccatagacagtgag
catggtgtaacatggggaaagagtgactgcaccattaacaagcccatcttcaagagcaat
tctaaggttttctttgtaatctcctatggaatagatagtaaaagtcactttgaacaaata
gtgactttcactgcaaatgcctcaagtggaaataatgaacatgccccagctagtgaactt
tacaaagtgaaaaggattggtgtcaaatacagaatttatgttttgatcacaagacacaag
gattctaccaagtacattaatttcactgccgggaaaaatgttatgcagaaacacgtgaat
caatcatttgtggttgtgaattatgtaagagactttaatcttactgtgaagatcaaggta
ccaatgaaacttggagacaaatatatctgggctgatccagatgttttaaagattccaggt
tgtcgcagagaacatgatgagaaacctattgcaacagattttgtggacaaactgaagaaa
aaggctgctgtggactgctctgtcgcaatgtgttgggtttttgtgtgcagtgttgtcatg
agaaaagacactcacaatacttacaacattgctggcaatgtcagctctggatggatagag
cagattggtcttgagtctgcccacttaagcttgatcagcagtgccactctggagtatgac
agaaaccaatacatctatttttctttggactcccaccaaaacatcccacctgtccaaacg
attgaaactgaagtggaggtgtaccctgagattgatttcacaaaggagataattggtggt
gctgtgggaggtctgttcctgttggctttgatcacacctgggctgtataaggccgggtta
ttcaagagccagttcaaacagataatgcaggatgcacctggtgatgaaccagggggtgat
gtacaagaaacggtaccagcggaataa
DBGET
integrated database retrieval system
