Esox lucius (northern pike): 105030030
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Entry
105030030 CDS
T04894
Symbol
atrx
Name
(RefSeq) transcriptional regulator ATRX isoform X1
KO
K10779
transcriptional regulator ATRX
Organism
els
Esox lucius (northern pike)
Pathway
els04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
els00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
105030030 (atrx)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
els03000
]
105030030 (atrx)
03036 Chromosome and associated proteins [BR:
els03036
]
105030030 (atrx)
Transcription factors [BR:
els03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
105030030 (atrx)
Chromosome and associated proteins [BR:
els03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
105030030 (atrx)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
Motif
Other DBs
NCBI-GeneID:
105030030
NCBI-ProteinID:
XP_028975098
LinkDB
All DBs
Position
LG04:complement(1132275..1178513)
Genome browser
AA seq
1470 aa
AA seq
DB search
MQQDCNDVASSKALNTNPSKQEVDSDSDEVPEVLLQNVAAEHSSDDDKVQQDSNNGKQDN
RRVRKCPLKLNKTDEERDGGTKDKEKTDKKPAAKRKLKADDSDNTESDSDEDRKKKKNRS
STASSKNTSKKKMKQKGLEHSSNSDSDLEKEIKSLSRLRPGKRRSSRAKKGEKEEEDDEE
DEKSKAGERKRSYELKRKTRVKLASKQQDSSSDDEEEEKDEGSGEESGDQQKIKPIVEET
LVAGRDAFLQSSGDEGNHETSQMAEDDDDDDPENRIAKKMLLAQIKANYSSGAEESSDDD
GQERDPEKKGEEEDEEPEEEEDDDDDDDDDDGDSASDVDVKKGAGRRHRLLRHKLKLSEG
ESGDEKPAKGKKETKTKRTRRKVGTDDSEDSDFEESAGSSESGVSEVISEESEEGGSRRR
TTRSSKRKDKKKEERSYAQKKKRRRIKVQDDSSEEKDDSASGSGKEDGDTPKGQRKKIRK
ILKDDKLRTETRDALKEEEERRRRIAEREQLREKLRETLYVPPPDQVLVVEEESAVACPI
TTKLVLDEDEETKEPLVQVHRNLVTKLKPHQVDGVQFMWDCCCESVKKTKTSSGSGCILA
HCMGLGKTLQVVTLVHTLLLCEKLEFSTALIVCPLNTVLNWLNEFEKWQFGFKDEESLEV
TELATVKRPQERAYALQRWQEDGGIMIIGYEMYRNLTQGRNIKSKKLKETFQKTLVDPGP
DFVFCDEGHILKNESSAVSKAMNSIRTRRRVVLTGTPLQNNLIEYHCMVNFIKENLLGSV
KEFRNRFVNPIQNGQAADSTDQDVRIMKKRAHILYEMLNGCVQRRDYSALTKFLPPKHEY
VISVRVTPIQCTLYRYYLEHLTGAGSVVEGGRGRAGTKLFQDFQMLSRIWTHPWCLQLDY
ISKENKGYFDEDSMDEFIASETEESSMSMTSEDEKPKKKKKQGKSKKKGSDDSDSDALEV
IKDWNTSSRGGDPSSRNRAEPEEEVRPASSPGTRSPDWHKEFVTEADSEILEHSGKMVLL
FEILRMAEEVEDKVLVFSQSLISLDLIEDFLELAGRAKEEEKPSPYKGEGKWFRNIDYYR
LDGSTNAQHRKKWAEEFNDSSNVRGRLFLISTKAGSLGINLIGANRVIIFDASWNPSYDI
QSIFRVYRFGQLKTCYVYRFLAQGTMEEKIYDRQVAKQSLSFRVVDQQQIERHFTMNELT
ELYTFEPDLLDDPTGKKSKRSTPVLPKDPFLAELLHSNKEQIVGYHEHDSLLDHKEEEAL
SEEDRKAAWAEYEAEKKGLSLRVNHGAFGGQMDMSGANSFHPFNVAALASMTNQQLEELI
NQGRQKVMEATNALKFLPRESLEDTIGRLWKENPALSEAQVQSMALGRQASVELELKRRE
AVYRDVLNKQQTLMMYVQKVIANRKVREQQIAMANQAQLMSQMNGMLGAGGLSQMELLGL
YQQLGALQGLPSHPSMGGKNPGPSQGGGHL
NT seq
4413 nt
NT seq
+upstream
nt +downstream
nt
atgcagcaggactgcaatgacgtggcctcctcaaaggctttgaacacaaacccctctaaa
caggaagtggactctgattccgatgaggttccggaggttctgctccagaatgtggcagcg
gaacacagctcggatgatgacaaggtgcagcaggacagcaataatggcaaacaggataac
aggagagtcaggaagtgcccgctgaaactcaacaagacagatgaagagagagacggaggg
acgaaagacaaagagaagactgacaagaagccggcagccaaacgtaaactgaaagcagac
gactccgacaacactgagtcggactcggacgaagatcgaaagaagaagaaaaataggtca
tccacagcttcttccaagaacacatccaagaaaaagatgaagcagaagggcttggagcac
tcttctaactctgactctgacctggagaaagagattaagtcactcagcagactgaggccg
gggaagaggaggagcagccgtgctaaaaaaggagaaaaggaggaggaggatgacgaggag
gatgagaagagcaaggctggggaacggaaaaggtcatatgagctgaagcgcaaaactaga
gttaaactagcttccaagcagcaggactcatcatctgatgatgaggaggaggagaaagat
gagggatctggagaagagagtggagaccagcagaagattaaacccatagtggaggagaca
ctagttgctggaagggatgccttcctacaatcctccggagatgaaggtaatcatgagacc
tcacagatggctgaagatgacgatgatgacgacccagagaacagaattgccaagaagatg
cttttggcccaaatcaaggccaattactcctcaggagccgaggagagctctgatgatgat
ggacaggagagagacccagagaaaaagggagaggaggaggatgaagagccggaggaagag
gaggatgatgatgatgatgatgatgatgatgatggcgactctgcctctgacgtggacgtg
aagaagggtgctgggcgccgccaccggctcctccgccacaaactgaagctgagcgaggga
gagtctggagacgagaagccggccaagggaaagaaggagacaaagacaaaaaggaccagg
cggaaagttggcactgatgactctgaggattcagactttgaggagtcagctggcagcagc
gagtctggagtgagtgaggtgatcagtgaggagtcagaggaggggggcagccgcaggagg
acaactcgctcctccaagaggaaagacaagaagaaggaggaaaggagctacgcccagaaa
aagaaacggcgaaggatcaaggttcaggacgattcctccgaggagaaggatgattctgcg
tcagggtcaggaaaggaagatggagacactcccaaaggtcagaggaagaagatcagaaaa
atcctgaaggatgacaagctgaggacagaaacgagggatgccctgaaagaggaggaggag
aggaggaggcgcatcgctgagagggagcaactgagggagaaactcagagagactttgtat
gtccctcctccggatcaggtgcttgtggtggaggaggagtcagccgttgcttgcccaatc
acaaccaaactagtgctggatgaagacgaggagaccaaggagcccctggtgcaagtccac
cgcaacctggtcaccaaactgaaaccacatcaggttgacggtgtccagttcatgtgggac
tgctgctgtgagtctgtgaagaagaccaagaccagctctggatccggctgtatcctggct
cactgcatgggtctgggcaagacgctccaggtggtgaccttggtgcataccctcctgttg
tgtgagaagttagagttctccactgctctcattgtttgtcccctcaacactgttctcaac
tggctcaatgagtttgagaagtggcagtttggctttaaggacgaggagagcctggaggtg
actgagctggccacggtgaagcgccctcaggaacgggcgtacgccctgcagcgatggcag
gaggatggaggcatcatgatcatcggctacgagatgtaccgcaacctcacgcagggacgc
aacatcaagagcaagaagctcaaagagaccttccagaagacgctggtcgatcctgggcca
gacttcgtgttctgtgacgagggccacatcctgaagaatgagtcgtcggctgtctccaaa
gccatgaactctatccggacccggcgaagagtggttctcactggaaccccactgcagaac
aacctgatagagtaccactgcatggtgaacttcatcaaggagaaccttcttggttcagtc
aaggagtttagaaaccgtttcgtcaaccccatccagaacggtcaggctgctgactccaca
gaccaggatgtacgtatcatgaagaagagggctcacatcctctacgagatgctcaacgga
tgtgttcagagaagagattattctgccctgaccaaattcctgcctccaaaacatgagtat
gtgatatctgtccgagtcactcccatccagtgtaccctctatcgatactacctggaacac
ttaacaggtgcagggagcgtggtggaggggggtcggggaagagctgggactaaactcttc
caggacttccagatgctcagcagaatctggacccatccctggtgcctgcagcttgactac
atcagcaaggaaaataaggggtactttgatgaagatagcatggatgagttcatcgcctca
gagacagaagagtcttctatgagcatgacttcagaggatgagaagccgaaaaagaagaag
aagcaaggaaagtcgaagaagaaggggagtgatgacagtgacagtgatgctctggaggtg
ataaaagattggaacaccagttctagagggggggacccttccagccgcaaccgggccgag
cctgaagaagaagtccgcccagcgtccagccctggtaccaggagcccagactggcacaag
gagtttgtgactgaggccgactctgagatcctggagcattctgggaagatggtgctgctg
tttgagattctccgcatggccgaagaggtggaagacaaagttcttgtattcagccagtct
ctgatctctctggacctgattgaagacttcctggagctggctggccgggccaaagaagaa
gagaaaccctctccttataaaggtgaggggaagtggttccggaacattgactactaccgt
ctggatggttccaccaacgctcagcacaggaagaagtgggctgaggagttcaatgacagc
agcaacgttcgtgggcgactgttcctgatctccactaaggctgggtctctgggtatcaat
ctaataggagcgaaccgtgtcattatcttcgacgcttcctggaacccctcatatgacatc
cagagcatcttcagggtctatcgcttcggacagctcaagacttgctatgtctaccgattc
ctagctcagggaaccatggaggagaagatctacgaccgacaggtggccaaacagtctctg
tctttccgggtggtggaccagcagcagattgaaagacacttcaccatgaatgaactgaca
gaactctatacctttgagccggacctgctggatgaccccactggcaagaagagcaagaga
tctacgcccgtgttgcccaaggaccctttccttgcggagctgctccacagcaataaggag
cagattgtcggttaccatgaacacgactcactgctggaccacaaggaagaagaggcactc
agcgaggaggaccgcaaggcagcctgggccgagtatgaggcagagaaaaagggtctgtct
ctgcgtgtgaaccatggcgcgtttggagggcagatggacatgagcggagctaacagcttc
caccccttcaacgtggcggcgctggcctctatgaccaaccaacagctggaggagctgatt
aaccagggccgtcagaaggtcatggaggccaccaacgccctgaagttcctgcccagggag
tccctagaagacaccattgggagattgtggaaggagaatcctgccctgtcggaggcccag
gtccagtccatggcgctgggcagacaggccagtgtggagctggagctgaaacgcagggag
gcggtctacagagacgtactgaacaagcagcaaacgctgatgatgtacgtccagaaggtc
attgccaatcgaaaggtcagagagcagcagatcgccatggccaaccaagcccaactgatg
agccagatgaacggcatgctgggagctggaggactcagccagatggaactgctggggttg
taccaacagctgggagcactgcagggtctaccctcgcacccctccatggggggcaagaac
cccggaccctcccagggagggggtcacctgtaa
DBGET
integrated database retrieval system
