Esox lucius (northern pike): 105030051
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Entry
105030051 CDS
T04894
Symbol
lsm5
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm5
KO
K12624
U6 snRNA-associated Sm-like protein LSm5
Organism
els
Esox lucius (northern pike)
Pathway
els03018
RNA degradation
els03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
els00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105030051 (lsm5)
09123 Folding, sorting and degradation
03018 RNA degradation
105030051 (lsm5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
els03019
]
105030051 (lsm5)
03041 Spliceosome [BR:
els03041
]
105030051 (lsm5)
Messenger RNA biogenesis [BR:
els03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
105030051 (lsm5)
mRNA degradation factors
5'-3' decay
Lsm complex
105030051 (lsm5)
Spliceosome [BR:
els03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
105030051 (lsm5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
105030051
NCBI-ProteinID:
NP_001297911
UniProt:
C1BWV8
LinkDB
All DBs
Position
LG21:complement(3786270..3789884)
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AA seq
91 aa
AA seq
DB search
MAATPATNPSQLLPLELVDKCIGSRIHIVMKNDKEIVGTLLGFDDFVNMVLEDVTEFEIT
PEGRRITKLDQILLNGNNITMLIPGGEGPEV
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atggcagccactccagctacaaatccatcacagttgctcccacttgaactcgtggacaaa
tgtataggttccagaatccacatcgtcatgaagaacgacaaagaaatcgttggaaccctg
ttgggttttgatgattttgtcaacatggtgttggaggacgtgacagaatttgaaatcaca
ccagagggcaggagaataaccaagctggaccagattctgctcaatgggaacaacattacc
atgctcatacctggaggagaaggacctgaagtataa
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integrated database retrieval system
