KEGG   Esox lucius (northern pike): 105030321
Entry
105030321         CDS       T04894                                 
Symbol
kdm3b
Name
(RefSeq) lysine-specific demethylase 3B isoform X5
  KO
K15601  [histone H3]-dimethyl-L-lysine9 demethylase [EC:1.14.11.65]
Organism
els  Esox lucius (northern pike)
Brite
KEGG Orthology (KO) [BR:els00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:els03036]
    105030321 (kdm3b)
Enzymes [BR:els01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.65  [histone H3]-dimethyl-L-lysine9 demethylase
     105030321 (kdm3b)
Chromosome and associated proteins [BR:els03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    105030321 (kdm3b)
SSDB
Motif
Pfam: PWWP_KDM3B Tudor_KDM3B JmjC DUF7030 Cupin_2 C1_2
Other DBs
NCBI-GeneID: 105030321
NCBI-ProteinID: XP_010902419
LinkDB
Position
LG04:13039908..13080443
AA seq 1868 aa
MGDSLELIGKRLLLLLNDGRSAAGPETEQAAWTRDWLRGTVRAVSVIGLASPGVEVSGGL
ATTTTAAAAGLTVFVEFEDCAWRRRSWVQVYGEEVRAVLVESSIVWANRSEPNQNHPTVD
GVPDRTAWPALVFRSLVDRVGLGSLVPVEFFGSRTLDFLPDGNSLQRFEVENDLRHSLLL
EQPCLQAAVSSWHSDYELQEILRKGSYTIQSRRVQVYQCEFEETWALGLVSRHDPNSHIM
EITMDQGEDTQVVDPRVIHVMLAEDENGKNTRRRKESDGGKGESGRRRRTASEGEEDVTL
KRFKGAGEGSVEGQNGSGSAKASVEGMVTWGAEGAAGGMDGGRVNSTANSSTSSEVTHGR
ASPNTVSSQIDQTNALPRYPKENGRSLSAQDRQGSVDSTAATPTPPPLKPAPSPFSNTSF
PSLGQMPSLVPGALAPKPPAAPATPEREEQSQSAYPKTAALVSPGPVTILSPSQGTASGV
ALSAPLGFSSKPTAWIGPSNLTEGSKTPILAAPGFRLPQSLPAGASVFGALTSQTNGSSS
TPSAPQDSSRPFGFPFGSAKSNEAQPQKQDQNLFFQCMSPKSGQNPGGPNQNPSPSQSQS
KDTNYFTAGSESLNKKPSGLFKPSASTEGLKKTILAPASAGLFGSTTSPLKEQSQVSEPQ
AAGNGVLSKPFGGDKHSPSFSSSSGGMRGSSMGMGTMGTPLTTATGATGGASNSIGANGG
TGGSFVVKTDIHQNLFLQGSKEPSNPFLAYGEKLSHSPFSGKPAPLQPETPGSAFESKSN
LFRMAEPPKGILSSPFASLSADVASSSSSSSAPSPNFTQRPQSDTPKPKEDPSTEDQDCS
AEGGSLDDQPCSTSGFPVFGNAVPGGSGEDAPMPFEQGQAQKFALEERGQASKRDSDSSA
NSDLSDLSETEEGLERGHAPGSLPGPVKEGAMLLQKTKGPGAAKSRPRNKPFKVGQSVLK
DVTKVRRLKQSGESFLQDGSCINVAPHLHKCRECRMERYRKYREQEPDDDDPNVACRFFH
FRRLAFTRKGILRVEGFLNPQQSDAMAMGLWLPSPSVQEGLDLDTSKYILANVGDQFCQL
VMSEKEAMMMVEPHQKVAWKRAVRGIREMCDVCETTLFNIHWVCRKCGFGVCLDCYRLRR
NRPLEEVDEGPDDEVFSWLKCVKGQRHEPQNLMPTQIIPGTALYNIGDMVHSARGKWGIK
ANCPCTSRHHRPLVRPGAPNGISQQSAVSSGSGGSGSGPIAGGGGPAGSTTSKPDGGETT
IVKTEPTSTTSLEGGGVGVDTSSTKSTVVPIHPAQTSNPTPKDTRTSTGEGNSTALHWLA
DLATQKAKAEDSKDSAPLRSVMGRDTRSPFGLDSFSALSKPSSSSSSSSPKLFNSLLLGS
SNTQPKPEGSSLRDLLNSGPGRLPQGTGDTGVPFPSVFSTSAGGDKMKGSLPNFLDHIIA
SVVETKKAEGRRTGEGGSELGGLGRRDGVMGLSVLDPHTSHSWLCDGRLLCLQDPANTNN
WKIFRECWKQGQPVLVSGIHKRLKGPLWLPEAFSQEFGDQDVDLVNCRNCAIISDVKVRD
FWDGFQVISKRLKGTDGQPMVLKLKDWPPGEDFRDMMPTRFEDLMENLPLPEYTKRDGRL
NLASRLPNFFVRPDLGPKMYNAYGLIETEDRSVGTTNLHLDVSDAVNVMVYVGIPEAEGE
HVKETEIAGCKEVMTTIEEGDVDEMTKRRAYEAKEKPGALWHIYSAKDAEKIRELLRKVG
EEQGQENPPDHDPIHDQSWYLDGALRRRLYEEYGVQGWAIVQFLGDAVFIPAGAPHQVHN
LYSCIKVAEDFVSPEHVRHCFRLTQEFRHLSTTHSNHEDKLQVKNIIYHAVKDAVGTLRA
HEPKLARS
NT seq 5607 nt   +upstreamnt  +downstreamnt
atgggggactctcttgaactgattgggaagcgacttctactgctcctcaatgatggcagg
tccgcagctggacccgaaacggagcaggccgcctggactcgtgactggctccgggggaca
gttcgggcggtcagcgtcataggtttggccagcccaggggtagaggtgagcggaggattg
gcgacaacaacaacagcagcagcagcggggcttacggtgtttgtagagttcgaagactgt
gcgtggcgtcggcggtcctgggttcaggtgtatggggaggaggtgagagctgtgctggtg
gagagctccattgtctgggctaaccgcagcgagcccaaccagaaccaccctacggttgat
ggagtccctgacaggacagcctggcctgccttggtgttccgttctctagtggaccgcgtg
ggtctgggttcccttgtccctgtggagttttttggaagcagaaccctcgacttcctccct
gatgggaactcactccagagatttgaggtagagaatgatctgaggcactctttgctgttg
gagcagccctgtcttcaggcagccgtgtccagctggcacagcgactatgagctccaggag
atcctgcggaagggctcctacaccattcagagcaggagggttcaggtgtaccagtgtgag
tttgaggagacctgggccctgggcctggtctctcggcacgacccaaactcccacataatg
gagatcaccatggaccagggcgaggacacccaggtcgtagatccgcgggtgattcatgtg
atgctggctgaagacgagaacgggaagaacactcgccggaggaaggagagcgacggcggg
aagggtgagagcggccgccgacggaggactgcctcggaaggcgaggaggacgtgaccctg
aagcgcttcaagggggcgggggagggatcagtggagggccagaatggaagcggctccgcc
aaggcttctgtggaggggatggtaacgtggggggccgagggagcggctggaggaatggat
ggaggcagggtgaacagcactgccaacagcagcacttcttccgaggtcacacacgggcgc
gcctccccgaacactgtttcctcccagatagatcaaacaaacgctctccctaggtacccc
aaggagaacggtcgctccctctccgcacaggaccgacaggggtctgtcgactccaccgca
gccacccccaccccaccccccctcaaacctgctccatcccccttctccaacacctccttc
ccctctctgggacagatgcccagcctggttcctggggctctggcccccaagcctccagca
gcccccgctacgccagagagagaggaacaatcccagtctgcctacccgaagactgctgcc
ctggtctctcccggcccggtcaccatcttgtccccgtcgcagggcactgcctccggtgtg
gctctctctgcccccctgggcttcagttccaaacccactgcctggataggaccatccaac
ctaactgagggctccaagactcccatcctggctgcacctgggttccggctgccccagtcc
ctgcctgctggtgcatctgtgtttggggcgttgacttcccagaccaacggttcctccagc
accccctccgccccccaagactcgtccaggcccttcggatttcccttcggaagtgccaag
agcaacgaggcccaaccgcagaagcaagatcagaacttattcttccagtgtatgagtccg
aagtctggccagaaccctggtggtcctaaccagaacccgagtcccagtcagagccagtcg
aaggacaccaactacttcacagctgggtcagagagcttgaataagaagccttctggtctc
ttcaagccctccgcctccacagagggactcaaaaagactatactggcccctgcatctgct
ggtctgtttggctccactacatctcctctcaaagagcagtcccaagtgtctgagccccag
gcagctggcaacggagtgctcagcaagcctttcggtggggacaaacactctccttccttc
agcagcagctctggggggatgagagggtctagtatgggcatggggacaatgggcacccct
ctcaccactgccactggagcgactggtggtgccagcaacagtattggtgctaacggtgga
acggggggcagctttgtcgtcaagacagacatccaccagaacctgttcctccagggctca
aaggagccctccaaccccttcttggcttacggggagaagctctcccacagcccgtttagc
ggcaaaccagcccctctgcagcctgagaccccgggttcagcctttgagagcaaatccaac
ctgttcagaatggcggagccgccaaagggcatcctgtcttccccctttgcctccctttca
gctgatgttgcctccagctcctcttcctcatctgcacccagccccaacttcacccagagg
ccccagtcagacacccccaagcccaaggaggacccatccactgaggaccaggactgctca
gctgagggtggttccctggatgaccagccctgctccacttctggcttccccgtgtttggg
aatgctgtccctgggggaagtggtgaggacgcacccatgccttttgaacagggccaagcc
cagaagtttgccctggaggagcgaggccaggcatcaaaacgtgactcagactccagcgca
aacagtgacctgtcagatctgagtgagacggaggaggggctggagaggggccacgctcct
ggcagccttccgggacccgtgaaggagggtgccatgctgcttcagaagaccaaaggccct
ggggcagccaagagccggccacgcaacaagccctttaaagtgggccagtcggtgctgaag
gacgtgactaaggtgcgtcgtctgaagcagtctggagagtctttcttgcaggacgggtcc
tgtatcaatgtggctccacacctccacaagtgtcgtgagtgtcgaatggagcgctatagg
aaataccgggagcaggagcctgatgacgacgaccccaacgtggcctgccgcttcttccac
ttccgcaggcttgcgttcacgcgtaagggcatcttgcgcgtagagggcttcctgaacccc
cagcagagtgacgccatggccatgggcttgtggctgccctcgccctccgtccaggagggc
ctggacctggacacttccaaatacatcctggccaacgtgggagaccagttctgtcagctg
gtgatgtctgagaaggaggccatgatgatggtggagccacatcagaaagtggcgtggaag
cgggcggtacgtggcatcagggagatgtgtgacgtgtgtgaaaccaccctcttcaacatc
cactgggtctgcaggaagtgtggttttggggtgtgtctagactgctaccgactacgccgg
aaccgacctctggaggaggtggatgagggaccagacgatgaggtgttctcctggttgaag
tgtgttaagggccagaggcacgaacctcagaacctaatgcccacacagatcatacccgga
acagcgctgtataacatcggtgacatggtgcactcggcccgaggcaaatggggcatcaag
gccaactgcccctgcaccagtcgacaccacaggcccctagtgcggcccggcgcgcccaac
ggcatttcccagcagtctgcggtctcttccggctcaggaggtagtggcagcggaccaatt
gcaggtggcggggggcccgctggttcaaccacttctaagccagatgggggggagacgacc
atagtcaaaacagagcccacgtctaccacatcattagaggggggaggtgtaggagtggat
acaagctccaccaaaagtaccgttgtcccaattcacccagcccagacctccaaccctacc
cccaaggacacacgcacctccacgggtgaaggaaactccactgccttgcactggctggca
gacctggccacccagaaagccaaggcagaggactccaaagactctgctcctcttcgctct
gtgatgggccgcgacacgcgctccccgttcggcttagactcgttcagcgccctgtccaag
ccttcatcctcctcctcctcctccagtcctaagttattcaacagtctgttgctgggctcc
agcaacacacagcccaagccggagggctccagcctcagagacctgctcaactcaggccca
gggaggctacctcagggcactggagacactggagtgccattcccctctgtcttctccacc
tcagcaggaggagacaagatgaagggcagcctgccgaacttcctggaccatatcattgcc
tcggtggtggagaccaagaaggctgagggccgtcgtacaggcgagggtgggagtgagctg
ggcggtttggggcgcagggatggggtgatgggcctcagtgtgcttgaccctcacacctcc
cactcttggctttgtgatggacgcctgctctgcctgcaggaccccgccaacaccaacaac
tggaagatcttcagagagtgctggaaacaggggcagccggtgctggtgtctggtattcat
aagcgtctgaagggacctctgtggctccctgaggccttcagccaggagtttggggaccag
gatgttgacctggtcaactgtcggaactgtgccatcatttctgacgtcaaggtccgagac
ttctgggatggtttccaggtcatctcgaagcgtctgaagggcactgacggccagcccatg
gtcctgaagctgaaggactggcctccaggagaagacttcagagacatgatgcccacgcgg
tttgaggatctgatggaaaacctgcccctcccagagtacaccaagagagacgggcgtctg
aacctggcgtcacgcctgcccaacttctttgtcaggcccgacctggggcctaagatgtac
aacgcatacggcctaatagagacagaagaccgtagtgtcggcaccacaaatcttcacctg
gacgtgtctgatgcggtcaacgtcatggtgtatgtcggcatccctgaggcggagggagaa
cacgtcaaggaaacggaaatcgctggatgtaaagaggtcatgaccaccatagaggaggga
gatgtggatgagatgaccaagaggagggcgtacgaggccaaggagaagcccggtgccctc
tggcacatctactcggccaaggatgccgagaagatccgagagctgctccgcaaggttggc
gaggagcaaggccaggagaaccctccagaccacgaccccatccatgaccagagctggtac
ctggacggagcgctgcgcagaaggctatatgaggagtacggtgtgcagggctgggccatc
gtacagttcctgggagacgcggtcttcatccctgccggggcgccccaccaggtccataac
ttgtacagctgtatcaaggtagcagaagactttgtctctccggagcatgtgaggcactgt
tttagactgacccaggagttcagacacctgtccaccacacactccaaccacgaggacaag
ctgcaggtgaagaacataatctaccatgccgtaaaggacgctgtggggactctgagagcc
catgaacccaagctagcacgctcctag

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