KEGG   Esox lucius (northern pike): 105030389
Entry
105030389         CDS       T04894                                 
Symbol
thoc6
Name
(RefSeq) THO complex subunit 6 homolog isoform X1
  KO
K13175  THO complex subunit 6
Organism
els  Esox lucius (northern pike)
Pathway
els03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:els00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    105030389 (thoc6)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:els03019]
    105030389 (thoc6)
   03041 Spliceosome [BR:els03041]
    105030389 (thoc6)
Messenger RNA biogenesis [BR:els03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     105030389 (thoc6)
Spliceosome [BR:els03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    105030389 (thoc6)
SSDB
Motif
Pfam: WD40_WDHD1_1st WD40_CDC20-Fz WD40 WD40_Prp19 Beta-prop_TEP1_2nd WDR55 Beta-prop_EML Beta-prop_EML_2 ANAPC4_WD40 EIF3I NBCH_WD40 Beta-prop_SCAP WD40_MABP1-WDR62_2nd Beta-prop_RIG_2nd Beta-prop_EIPR1 Beta-prop_CAF1B_HIR1 Beta-prop_IP5PC_F Beta-prop_NOL10_N WDR54 WD40_like Beta-prop_WDR90_POC16_2nd Beta-prop_IFT140_1st Beta-prop_IFT122_1st Beta-prop_TEP1_C Beta-prop_DCAF4 Beta-prop_Vps41 Beta-prop_WDR75_1st CATSPERD-E_C
Other DBs
NCBI-GeneID: 105030389
NCBI-ProteinID: XP_010902538
LinkDB
Position
LG11:complement(48581572..48590234)
AA seq 323 aa
MGPVEHLHMSVFSQSFSPCGRFLAAGNNYGEIAVFSLSSALSPDATDLSQKPILTFTAHE
GPVFSLLSTDSHLLSAGNGEVSAWSWAELIKRNTKAAWTRRPNYKSSLEIPEINAMTINP
TENSLVIGGGDNNIHIMDLESGIFKSVLQGHTDYIHCLSVREREGEILSGGEDGAVRIWD
CRTGHSVHCIEVFKYEDCARPQYGKWISCLTTDSDWMLCGGGPSLSLWHLRSMSPTSVFP
LSGCQRQATFYQDMILSVGEGQFVSHCLMGGEVKAQIPCTPHSLNTLALNLNSTEHRVLT
VGGSSHQIDVFANLYYRSFSLSF
NT seq 972 nt   +upstreamnt  +downstreamnt
atgggccctgtcgagcacctccacatgtccgtgttctcccagagtttctctccttgtggt
cgcttcctagccgctggcaataactatggtgagatagcagtgttcagtctctcctctgcg
cttagtcccgatgctacagacctgagccagaaacccatccttacctttacggctcacgaa
gggcctgttttctctcttctctccacggactctcatctcttgagtgccggcaatggagag
gtcagtgcctggagctgggcggaactcatcaagaggaataccaaggctgcttggacaagg
agaccaaattacaaatccagcctggagatcccagaaatcaatgcgatgacgataaatccc
actgagaacagtcttgtgattggtggaggggacaataacatccatataatggatctggag
agtggcatctttaagtcggttctccagggtcatactgactacatccactgtctgagtgtg
agagagcgggagggggagatcctctctggtggggaggacggtgctgtcaggatatgggac
tgcagaaccggccactctgtgcactgcatagaggtcttcaaatatgaggactgcgcccgt
ccccagtatggcaagtggatcagctgcctgaccaccgattctgattggatgctctgtgga
ggaggcccatcactttctctgtggcacctccgctccatgtcacccacctccgttttccct
ctatctggatgccagcgacaagccaccttctaccaagacatgattttgtcagtgggcgag
ggacagtttgtgtcccactgtctcatgggtggagaggtgaaggctcagattccctgcacc
ccacactccctcaacacgttggcactcaacctcaacagcactgaacacagggtgctgacc
gtaggtggcagcagtcaccagattgatgtttttgccaacctgtactacagatccttttct
ctgtctttctga

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