Esox lucius (northern pike): 105030407
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Entry
105030407 CDS
T04894
Name
(RefSeq) high mobility group protein 1.2-like
KO
K10802
high mobility group protein B1
Organism
els
Esox lucius (northern pike)
Pathway
els03410
Base excision repair
els04140
Autophagy - animal
els04217
Necroptosis
Brite
KEGG Orthology (KO) [BR:
els00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
105030407
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
105030407
09143 Cell growth and death
04217 Necroptosis
105030407
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
els03036
]
105030407
03400 DNA repair and recombination proteins [BR:
els03400
]
105030407
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
els04147
]
105030407
Chromosome and associated proteins [BR:
els03036
]
Eukaryotic type
Nucleosome assembly factors
HMG (high mobility group) proteins
105030407
DNA repair and recombination proteins [BR:
els03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
105030407
MMR (mismatch excision repair)
Other MMR factors
105030407
Exosome [BR:
els04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
105030407
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box_2
HMG_box
HMG_WDHD1
HTH_Tnp_Tc3_2
HTH_28
Sigma70_r4
HTH_32
HTH_23
Sigma70_r4_2
CENP-B_N
HMG_box_5
Motif
Other DBs
NCBI-GeneID:
105030407
NCBI-ProteinID:
XP_010902561
LinkDB
All DBs
Position
LG07:complement(9399335..9405030)
Genome browser
AA seq
447 aa
AA seq
DB search
MKCQELSETFRDKVVQRYKLGEGYKKISNTLGIPLSTVKSIIKKWKVYGTTETLPRSGRP
SKISSWAKKILALELTMRPTATLKELQTSMAEMGENVHESTIARSFANCSRNGRSAQMRP
SQTNDNLESRMAFAVKHLDYTDVETGKNPSKPRGMMSSYAYFVQMCREEHKKKHPEASIN
FSEFSKTCSERWKAMTAKERGKFEDLAKLDKLRYEREMKSYVPPKGEKKKKKKLKQPIAP
KRPPTAFFIFCADLRPQVKVETPGLSIGDVAKKLGEKWNKLSAEDKVPYEKKAAKLKEKY
EKDITAYRNKGKVPVSMPAKATAPAKDDDDDDDDDHNEDGNKDGDDNNEDGNKDGDDNNE
DGNTDGDDNNKDGNTDGDDKNKDDIKDGDDNNKEDSEDCNDNNKDDNKDEDDDNKDDNMD
DDTKNTDKNDDVNNNNDKNDDHNDDAE
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgaagtgccaagagctttcagaaacgttcagggataaagttgtacagcggtacaagtta
ggtgaaggttacaagaaaatctccaatacattaggtatcccattgagtacagtcaagtca
atcattaagaagtggaaggtgtatggaacaactgagactctgcccagatctggacggcct
tccaaaataagcagttgggccaaaaagattttagctctagagctcactatgagaccaact
gccactttgaaagagcttcagacttccatggctgagatgggagagaatgtccatgaatca
actatagcccgatcatttgccaactgtagccgaaatgggcgatcggcacaaatgaggccg
tcacagacaaacgacaatcttgaatccagaatggcttttgcagtaaagcatttagattat
accgatgttgagacgggtaaaaatccatcaaagccaaggggcatgatgtcctcttatgcc
tactttgttcagatgtgccgggaggagcacaagaagaagcacccagaagcttcaatcaac
ttctcagagttctccaagacgtgctctgagagatggaaggctatgactgcaaaggaaagg
ggcaagtttgaggatctggccaagcttgacaaattgcgctacgaaagggaaatgaaaagc
tatgttcctcccaagggagagaagaagaagaagaagaagcttaagcaacccatcgcccca
aagagaccacctactgcgttcttcatcttctgcgctgacctccgaccccaggtgaaggtg
gagactcctggcctgtccattggtgatgtggccaagaaactgggagagaagtggaacaag
ctctcagctgaagacaaggtgccatacgagaagaaagccgccaagctgaaggagaagtat
gagaaggacatcaccgcgtaccgcaacaagggtaaggttcccgtcagcatgccggcaaaa
gctaccgctcccgccaaggatgacgatgatgacgacgatgatgaccacaacgaagatggt
aacaaggatggtgatgacaacaatgaagatggtaacaaggatggtgatgacaacaacgaa
gatggtaacacggatggtgatgacaacaacaaagatggtaatacggatggtgatgacaag
aacaaagatgatatcaaggacggtgatgacaacaacaaagaggatagcgaggactgtaat
gacaacaacaaagatgataacaaggacgaagatgacgacaacaaagatgataacatggat
gatgataccaaaaacactgacaaaaacgatgatgtcaacaacaacaatgataaaaatgat
gaccacaacgatgatgcagagtag
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