Esox lucius (northern pike): 105030479
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Entry
105030479 CDS
T04894
Symbol
top3a
Name
(RefSeq) DNA topoisomerase 3-alpha
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
els
Esox lucius (northern pike)
Pathway
els03440
Homologous recombination
els03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
els00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
105030479 (top3a)
03460 Fanconi anemia pathway
105030479 (top3a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
els03032
]
105030479 (top3a)
03400 DNA repair and recombination proteins [BR:
els03400
]
105030479 (top3a)
Enzymes [BR:
els01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
105030479 (top3a)
DNA replication proteins [BR:
els03032
]
Eukaryotic type
DNA Topoisomerases
105030479 (top3a)
DNA repair and recombination proteins [BR:
els03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
105030479 (top3a)
FA (Fanconi anemia) pathway
105030479 (top3a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_GRF
Toprim
Zn_ribbon_Top1
Zn_ribbon_GRF_2
zf-C2H2_10
Zn_ribbon_recom
Motif
Other DBs
NCBI-GeneID:
105030479
NCBI-ProteinID:
XP_012991437
LinkDB
All DBs
Position
LG11:complement(4113283..4125252)
Genome browser
AA seq
1033 aa
AA seq
DB search
MRIHQLARALFTSRRSIHLELFRRLNFAGPNCSDSAGPGDMIRRTQVKRVLCVAEKNDAA
KGIADIMSNGRMRRMEGLSVYNKLYEYEYNLFGQNVTVCMTSVSGHLLGMEFKAPFQKWH
SCNPVQLFDAEVEKYCPENSVQIKRTLEAEVRKCQALVIWTDCDREGENIGFEVIDVCRA
VKPVLQVFRARFSEITPNSIRRACDTLTEPDINVSDAVDVRQELDLRIGASFTRFQTLRL
QKIFPASLANQLISYGSCQFPTLGFVVERFKSIQAFIPETFYKIKVLHEVDEECVEFSWK
RNRLFNHTACLVLYQICMEDPIATVISVSSKPKSKWRPLPLDTVEMEKLASRKLKISAKE
TMKIAEKLYTQGLISYPRTETNQFPKDLALGPLVEHQIPSPQWGGFARGVLEQPGGPNPR
QGTKTDQAHPPIHPTKYTDALQGNEQRLYEFIVRHFLACVSQDAMGQETVVDLDIADERF
SANGLMIIKRNYLDVYPYDRWSAKVIPVYEVGSQFQPSAIEMVDGQTSPPQLLTEADLIS
LMEKHGIGTDATHADHIETIKSRMYVGLTADQRFLPGELGMGLVEGYNSMGYEMSKPDLR
AELEADLKLVSEGRKDKQGVLLHHINKYKAVFIESVKKAKRLDEALSAYLGAAQEFTESE
QQDLEIPLPVRKCPQCGRDMVLRRRKEGNGKYLTCVGYPECKCSVWFPDTVLEVSRDESV
CSTCQPSPVHMLKFKFRRGSLPPTMPLEFLGCIGGCDETLREVLNLKYLRMAGGGPAGGR
ARRDPPPAQRSRPAAPRPDPLPSQTPNPSSSWPGRPRADAQAPPPAPSAGDITVCNCGSE
ALLLTVRKDGPNQGRQFYKCSSGGCNFFLWADQPDTPPPDRQGAPPARPQQPPRISAGFG
NVGVGGGAPGDVVCNCSEPAVQRTVQKEGPNKGRLFHTCGRPREQQCGFFLWADENVPPP
GPGGYRGGGRGGYDEGGQGGYGGGERGGYGGGDAGKRGRKTGGGGAPTATAKKPRTCGIC
HAPGHTRATCPQR
NT seq
3102 nt
NT seq
+upstream
nt +downstream
nt
atgcggatacaccagctggccagggctttatttacatccagaaggtcgatacatctcgag
ttgttccggaggcttaactttgccgggccgaattgttcagattcagcgggacctggagac
atgatccggaggacccaggtcaaacgtgttctctgtgtggccgagaagaatgacgcggcc
aagggaatcgcagacattatgtcgaacggcagaatgaggaggatggagggcctgtccgtc
tataataaactgtatgagtatgaatacaatctgtttggacagaacgttacagtgtgtatg
acatcggtatcaggtcatcttcttggtatggagttcaaagcgccattccagaaatggcac
agctgtaatcctgtgcagctgtttgatgctgaggtggagaagtactgtcctgagaactct
gttcagatcaagcgtaccttagaggctgaagtgagaaagtgtcaggcgttggtcatctgg
acagactgtgacagagaaggagagaacatcggctttgaggtcatcgacgtctgcagagca
gtgaagccggtgttgcaggtgttccgtgcacggttctccgagatcactcccaattccatc
cgacgggcgtgtgacacattaacagaaccggacatcaacgtcagcgacgccgtggacgta
cgccaagaactggacctcaggataggtgcgtccttcaccaggttccagacactccgccta
cagaagatcttcccagcatcgttggccaatcagctgatctcttacggcagctgtcagttc
cctactctgggctttgtggttgaacgcttcaagtctatccaggccttcataccagaaacc
ttctacaagatcaaagttctccatgaggtagatgaggagtgtgtagagttcagctggaag
aggaaccgacttttcaaccacaccgcctgtctggtactctaccagatctgtatggaggat
cccatagcaactgtaatctcagtatccagtaaacccaaaagcaagtggagaccacttccc
ctggacactgtggaaatggagaagctggcttccaggaagttgaagatcagtgccaaggag
accatgaagattgctgagaaactttatacgcaggggctgatcagctaccctcgtactgag
accaaccagtttcctaaggacctggctctgggtcctctggtggagcaccagatcccaagt
ccccagtggggaggctttgccaggggggtgttggagcagccgggggggccaaaccctcga
caggggaccaagactgaccaggcccatccccccatacaccccaccaagtacacagacgca
ctgcagggcaacgagcaacgcctttatgagttcatcgtgcgccatttcctggcatgtgta
tcccaggatgccatggggcaggagaccgtggtggatctggacatagctgacgagaggttc
tccgctaacggactcatgatcatcaagaggaactatctggatgtctacccctatgaccgc
tggagcgctaaggtgattccggtttatgaagtgggcagccagtttcaaccgtccgcaatc
gagatggtcgatggtcagacctcccctcctcaactcctcaccgaggcagacctcatttca
ctcatggagaaacatggcattggaacggatgcaacccacgcggaccacatcgagaccata
aagagtcgcatgtatgtggggctgaccgctgaccagaggttcctgccaggggaactgggc
atgggcttagtagagggttataactccatggggtatgagatgtctaaaccagacctgagg
gcggagctggaggcggacctgaagctggtgtcggaggggaggaaggacaaacagggcgtg
ttgcttcaccacatcaacaaatacaaggccgtcttcatagaatctgtcaagaaggccaag
aggttggacgaggctctgtcggcctatctgggcgcggcccaggagttcacggagtcagag
cagcaggatttggagattcctctccctgtcaggaagtgtcctcagtgtgggcgggacatg
gtgctgcgaagaagaaaggaggggaatgggaagtacctgacctgcgttggttacccagaa
tgcaagtgttctgtctggtttcctgacaccgtactagaggtcagcagagatgagtctgtc
tgttccacctgtcagccgagccctgtacacatgttaaagttcaagttccgccggggcagc
cttccccccacgatgcctctggagtttttgggctgcatcggggggtgtgacgagacactg
agggaagtgctcaacctgaaataccttcgaatggcaggaggagggccggcggggggacga
gcgagacgagacccccctcctgcccagagatctcgcccagcagcccccagaccagacccc
ctgccctctcaaacccccaacccttcctcctcctggcctggccgcccgcgggctgacgcc
caggcccctccccccgcacccagcgccggtgacatcacagtgtgtaactgcgggtcggag
gcgctgctcctcaccgtgcgtaaagacggacccaaccaaggacgccagttctacaagtgt
tcctcagggggctgtaacttcttcctgtgggccgaccagcccgacactccacctccagac
cgccagggggcgccacctgccagaccacagcagcccccgaggatttcggcggggtttggg
aacgtgggggtcggtggaggggccccgggggacgtggtgtgcaactgcagcgagccggcc
gtgcagcggacagtgcagaaggaggggcctaataaaggacggctgttccatacctgcggg
aggcccagagaacagcagtgcgggtttttcctctgggccgatgagaacgtaccaccacca
ggtcccggagggtatcgtggaggggggcgggggggttatgatgaagggggccaggggggt
tatggaggaggggagcgggggggttatggtgggggagacgcggggaagagggggaggaaa
actggcggtggaggagccccgaccgccacggccaagaaaccccgtacctgtggcatctgt
cacgcgccgggacatactcgcgccacctgccctcagcgctga
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integrated database retrieval system
