Esox lucius (northern pike): 105030481
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Entry
105030481 CDS
T04894
Symbol
shmt1
Name
(RefSeq) serine hydroxymethyltransferase, cytosolic
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
els
Esox lucius (northern pike)
Pathway
els00260
Glycine, serine and threonine metabolism
els00630
Glyoxylate and dicarboxylate metabolism
els00670
One carbon pool by folate
els01100
Metabolic pathways
els01200
Carbon metabolism
els01230
Biosynthesis of amino acids
els01240
Biosynthesis of cofactors
Module
els_M00141
C1-unit interconversion, eukaryotes
Brite
KEGG Orthology (KO) [BR:
els00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
105030481 (shmt1)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
105030481 (shmt1)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
105030481 (shmt1)
Enzymes [BR:
els01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
105030481 (shmt1)
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GFIT
Motif
Pfam:
SHMT
Motif
Other DBs
NCBI-GeneID:
105030481
NCBI-ProteinID:
XP_028979487
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Position
LG11:complement(4142537..4157405)
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AA seq
484 aa
AA seq
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MSLSNGNGHHVSQEVWESHNKMMQEPLSTNDSEVFDIIKREKHRQTFGLELIASENFTSR
AVLEALGSCMNNKYSEGYPGQRYYGGTEHVDELERLCQRRALEAYRLDAERWGVNVQPYS
GSPANFAVYTAIVEPHGRIMGLDLPDGGHLTHGFMTDKKKISATSIFFESMPYKVNPDTG
LIDYDRLEENARLFHPRLIIAGTSCYSRNLDYARLRRIADDNGAFLLADMAHISGLVAAG
VVPSPFEYCDVVSTTTHKTLRGCRSGVIFYRKGVRSVDAKGKETLYNLESLINQAVFPGL
QGGPHNHAIAGVAVALKQAMTPEFKAYQQQVLSNCRALADALIGHGYKIVTGGSDTHLIL
LDLRPNGTDGGRAEKVLEAAAIACNKNTCPGDKSALRPSGLRFGSPALTSRGMVEDDFRK
VAEFIHRGIQITLDIQSSLQPKATLKEFKEALAGEQKHQERVAELRREVEGFAGRFPMPG
LEEL
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgtctcttagcaatggtaatggtcaccatgtcagtcaggaggtctgggagtcacacaac
aagatgatgcaggaacctctgtccaccaacgactctgaggtatttgacatcataaagaga
gagaagcatcgtcagacgtttggtctggagctgatagcgtcagagaacttcacctccaga
gctgttctagaagccctgggttcctgcatgaacaacaaatactctgaaggataccctgga
cagaggtactatggtggtacagaacatgtggatgagttggagcgtctgtgtcagagaagg
gccctggaggcctacaggctggacgctgagagatggggtgtcaacgtacagccttactct
ggttcccctgctaactttgcggtgtacactgccatcgtggaacctcatggtaggatcatg
ggactggaccttcctgacggaggtcacctgacacacggcttcatgaccgataagaagaag
atctccgctacgtccatcttctttgagtccatgccttacaaggtgaatccagacactggt
ctgatagactatgacagactggaggagaatgccagattgttccaccccagactcatcatt
gcaggcaccagctgttattcccgtaaccttgactatgcccggctgcgtcgtattgccgat
gacaacggggctttcctattggctgacatggcacatatcagtgggctggtagcggccggt
gtcgtcccgtctccattcgagtactgcgacgtggtctccacgacaacacacaagacgctg
cgaggttgccgctccggggtcatcttctacaggaagggtgtgcgtagtgtggacgccaag
gggaaggagactctgtacaatctggagtctcttatcaaccaggccgtgttccctggtcta
cagggaggaccccacaaccacgctatagcaggtgtggctgtggccctaaaacaggccatg
accccagagttcaaggcgtaccagcagcaggtgttgtctaactgtcgagccttggcagac
gccctgattggacacggatacaagattgtcactgggggatctgatacccatctgattttg
ctggacctacggccaaacgggaccgacggagggcgggctgagaaggttctagaagcagct
gccatcgcctgcaataaaaacacctgcccaggtgacaagagcgcattgcgtcccagcggt
ctgaggtttggttctcctgctctcacctccagaggaatggtggaggacgacttcaggaag
gttgcagagttcatccacagaggtatccagatcaccctggacatccagtccagcctacag
cccaaagccaccctgaaggagtttaaggaggccctggctggagagcagaagcaccaggag
cgggtggccgagctgagaagggaggtggagggcttcgctgggcggttccccatgcccggc
ctggaggaactgtag
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