KEGG   Esox lucius (northern pike): 105030665
Entry
105030665         CDS       T04894                                 
Symbol
thoc3
Name
(RefSeq) THO complex subunit 3
  KO
K12880  THO complex subunit 3
Organism
els  Esox lucius (northern pike)
Pathway
els03013  Nucleocytoplasmic transport
els03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:els00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    105030665 (thoc3)
  09122 Translation
   03013 Nucleocytoplasmic transport
    105030665 (thoc3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:els03019]
    105030665 (thoc3)
   03041 Spliceosome [BR:els03041]
    105030665 (thoc3)
Messenger RNA biogenesis [BR:els03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     105030665 (thoc3)
Spliceosome [BR:els03041]
 Complex C
  Other components
   EJC/TREX
    105030665 (thoc3)
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    105030665 (thoc3)
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_IFT122_1st Beta-prop_WDR5 WD40_CDC20-Fz WD40 Beta-prop_WDR3_1st WD40_Prp19 Beta-prop_EML_2 WD40_WDHD1_1st WDR55 ANAPC4_WD40 Beta-prop_WDR36-Utp21_2nd EIF3I Beta-prop_CAF1B_HIR1 WD40_Gbeta Beta-prop_WDR3_2nd Beta-prop_Aladin Beta-prop_WDR19_1st Beta-prop_WDR90_POC16_2nd Beta-prop_RIG_2nd Beta-prop_TEP1_2nd Beta-prop_Vps41 WD40_MABP1-WDR62_2nd Beta-prop_IFT140_1st Beta-prop_EML eIF2A DSE1_N RMC1_N Beta-prop_WDR35_TULP_N Beta-prop_WDR36-Utp21_1st WD40_RFWD3 Beta-prop_NOL10_N Beta-prop_TEP1_C NBCH_WD40 Beta-prop_HPS5 Tricorn_2nd PD40 WD40_MABP1-WDR62_1st WDR90_beta-prop_4th TRM82_WD Beta-prop_SPT8 PAC11 Beta-prop_ACSF4 ASA1 B-prop_COPA_B_2nd Beta-prop_WDR75_1st Beta-prop_EIPR1 Beta-prop_NUP159_NUP214 Peptidase_S9_N Beta-prop_Nup120_160 DPPIV_N Beta-prop_NWD2_C Beta-prop_ELP1_1st Beta-prop_WDR11_1st Cytochrom_D1 WD_LRWD1 Beta-prop_SCAP YNCE
Other DBs
NCBI-GeneID: 105030665
NCBI-ProteinID: XP_010902960
UniProt: A0A3P9AKI0
LinkDB
Position
LG04:complement(22905601..22910130)
AA seq 322 aa
MASKYYQEMQENFRNNNKSREFPAHSAKVHSVAWSCDGRRLASGSFDKTASVFVLEKDRL
VKENNYRGHSDSVDQLCWHPTNPDVFVTASGDKTIRIWDVRTTKCTATVNTKGENINICW
SPDGQTIAVGNKDDVVTFIDVKSHRSRAEEQFKFEVNEISWNNDNDMFFLTNGNGCINIL
SYPELKPIQSINAHPSNCICIKFDPTGKYFATGSADALVSLWTVEELVCVRCFSRLDWPV
RTLSFSHDGKMLASASEDHFIDIAEVETGEKLWEVQCESPTFTVAWHPKRPLLAYACDDK
EGKYDSNREAGTVKLFGLPNDS
NT seq 969 nt   +upstreamnt  +downstreamnt
atggcgtccaaatattatcaagagatgcaggagaattttagaaataacaacaaaagcaga
gaattccctgcgcatagcgctaaagtacattcagtagcatggagttgcgacggtcggagg
ttggcttctggatcgtttgataaaacagcaagcgtatttgtcttagaaaaggaccgtttg
gttaaggagaacaattacagaggccattcagacagcgttgaccagctatgttggcatccg
accaatccagatgtgttcgtcactgcttcaggggacaagaccatacgcatctgggacgtc
agaacaaccaagtgcacggctaccgtcaacaccaaaggggaaaacatcaatatctgttgg
agtcccgacggccagacaatagctgtcggaaacaaggatgacgtggttacgtttatcgac
gtgaaatcccatcggtcacgagcggaggagcagttcaaatttgaagtcaacgaaatctcc
tggaacaatgacaatgacatgttcttcctgaccaatggcaatgggtgcatcaatatcttg
agttatcctgagctgaagcccatccagtcaattaacgcccatccttccaactgcatctgt
atcaagttcgaccctacggggaagtactttgccacagggagtgcagacgcgctggttagt
ctgtggacggttgaggaactggtgtgtgttcgctgtttctccaggttggactggccagtg
aggacattgagtttcagccatgatggcaagatgcttgcttcagcctctgaggatcacttc
atagacatcgccgaggtggaaactggagagaagctgtgggaggtccagtgcgagtcccct
acttttacggtggcctggcatcccaagaggcctctgttggcatacgcctgcgacgacaag
gaagggaaatacgacagcaaccgagaggcgggcaccgtgaagttgttcggattgcccaat
gattcgtga

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