Esox lucius (northern pike): 105030692
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Entry
105030692 CDS
T04894
Name
(RefSeq) ATP-dependent RNA helicase DDX19B
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
els
Esox lucius (northern pike)
Pathway
els03013
Nucleocytoplasmic transport
els03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
els00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
105030692
03015 mRNA surveillance pathway
105030692
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
els03019
]
105030692
Enzymes [BR:
els01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
105030692
Messenger RNA biogenesis [BR:
els03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
105030692
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DUF1028
Motif
Other DBs
NCBI-GeneID:
105030692
NCBI-ProteinID:
XP_010903020
UniProt:
A0A3P9AF30
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Position
LG17:complement(41142685..41185739)
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AA seq
492 aa
AA seq
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MATDSWALAVDEQEAAAESIGSLHIKDKPEENGTASTETTTTAASSSTCSKAEAGEGDKT
GEEDDKDDKAAQSLLNKLIRSNLVNTTNQVEVLQRDPNSPLYSVKSFEELRLKPQLLQGV
YAMGFNRPSKIQENALPMMLAEPPQNLIAQSQSGTGKTAAFVLAMLSHVDPNNKFPQCLC
VSPTYELALQTGKVIEQMGKYYSEVKLVYAIRGNKLQRGTQLQEQIVIGTPGTMLDWCLK
FKFIDPKKIKVFVLDEADVMIATQGHQDQSLRIQRMLNKQCQMLLFSATFEETVWNFAQR
MVPDPNIIKLKREEETLDTIKQYYVLCNSKEEKFMALCNIYGAITIAQAMIFCHTRKTAG
WLAGELSREGHQVALLSGEMQVEQRACVIDRFRDGKEKVLVTTNVCARGIDVEQVSVVIN
FDLPVDRDGNPDNETYLHRIGRTGRFGKRGLAINMVDSKFSMNVLNKIQDHFNKKIEKLD
TDDLDEIEKIAS
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atggcaacggactcctgggccctggctgtagacgaacaagaagccgctgcggaatcgatt
ggtagcctgcacatcaaagacaagcctgaggaaaatggcacagcaagcactgaaacaaca
accacagcagcaagttcttcaacatgttcaaaagcagaagcaggagaaggagacaaaaca
ggggaggaggatgacaaagatgacaaggcggcccagtcattgttaaataagttgatacgc
agtaacctagtgaacacaaccaatcaggtggaggttcttcagcgggatcctaactctcct
ctctactctgtcaaatcatttgaggagctgcggcttaaacctcagctacttcagggagtg
tacgccatgggtttcaaccgcccctccaaaatccaagagaatgctttacccatgatgctt
gcagaacctccacagaacctaatagcccaatctcagtcaggaaccgggaagactgctgcc
ttcgtcctggccatgctcagtcacgttgaccccaacaacaagtttcctcagtgtttgtgt
gtatctcctacctatgagctggccttacagacagggaaggtcattgaacagatggggaag
tactactcggaggtcaaacttgtctacgccattagaggaaacaaattgcagagaggtact
cagctccaggaacagatagtaattgggacgccaggcaccatgctggactggtgtttgaag
ttcaagttcatcgaccccaagaagatcaaagtttttgtcttggacgaggctgacgtcatg
attgccacacagggacaccaggaccagagcctacgcattcagaggatgttaaataagcag
tgccagatgctcctgttctcagccacatttgaggagactgtttggaactttgcccagcgc
atggtcccagaccccaacatcataaagctgaagagagaggaggagacgctggacaccatt
aagcagtactatgtcctctgtaatagcaaagaggagaaattcatggcactctgcaacatc
tacggcgccatcaccattgcccaggccatgatattctgtcacaccagaaagaccgctggc
tggctggctggtgagctgtcccgggagggccaccaggtggcgctgcttagtggggagatg
caggtggagcagagagcttgcgtcatcgaccgcttcagagacggaaaggagaaagttctg
gtcaccactaacgtctgtgccagaggtatcgatgtggagcaggtttctgtggtgataaac
tttgacctaccagtggacagagatggtaacccggacaatgagacgtacctgcatcggatt
ggtcgcacaggtcgttttgggaagagaggattggccatcaatatggtggacagcaagttc
agcatgaatgtcctcaacaagatccaggatcacttcaataagaaaattgaaaagctggac
actgatgatctggatgagattgaaaaaatagccagttga
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